Shewanella aegiceratis: K0H80_04105
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Entry
K0H80_04105 CDS
T09153
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg00630
Glyoxylate and dicarboxylate metabolism
saeg00680
Methane metabolism
saeg01100
Metabolic pathways
saeg01120
Microbial metabolism in diverse environments
saeg01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0H80_04105 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0H80_04105 (fdhF)
Enzymes [BR:
saeg01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0H80_04105 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
Fer4_7
NAD_binding_8
Fer4
DAO
FAD_oxidored
Fer4_9
HI0933_like
NAD_binding_7
Fer4_8
Fer4_6
Fer4_21
Lys_Orn_oxgnase
FAD_binding_2
Fer4_18
Fer4_10
GIDA
Amino_oxidase
Fer4_17
FAD_binding_3
Thi4
AlaDh_PNT_C
F420_oxidored
Fer4_Nqo3
Fer4_13
2-Hacid_dh_C
Fer4_2
Fer4_16
FMO-like
Emfourin
CxC7
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
QYJ83217
LinkDB
All DBs
Position
complement(921316..925548)
Genome browser
AA seq
1410 aa
AA seq
DB search
MIELTFDGQVVKANRGENLLTCAKAAGIAIPNLCHLGKQLDDKLAGKQDCNLCYVEVRDE
KGDLHTVKACKTQVEAPLEVITHSAALSKRRQAALKHLLSDHFADCEAPCQQACPAGVDV
QSYLLHIAQGNHKEAVKVIKQTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRHAA
DLDLDSEDTYVPPKAPATGKRVAIIGSGPAGISAGYYLSNSGHEVTIFESMPKAGGWLRY
GIPEYRLPKQILDREIDLLCQNGLVIQTETRLGRDIHLKEMVSQFDAVCLAIGAQKAVPM
NYPGVDLEGCYLGVDYLKDHCTDNNYQTGKKVAVIGGGNTAIDCARTALRKGAEVTLVYR
RTRDEMPAEVYEIEEAEHEGVRFYFLTNPIENHGDANGRINAVTFEKMRLGEPDASGRRS
PQATGETFTEAFDTVIPAVSQTPDMTFLEHPESQLSTGEVALTRWNTFSGCEHTMSSGVE
KLFVLGDSRTGPATAVAAVADGRKAANAIEKLLSGELSCELTPAPFNSQKQDEQKPDSRH
FPARLLQAKAKMPELAINKRLDNFDEIELGFNDEEAMLEAARCLECGCQANTECALRDYA
TEYRVDGAALDKQGHRAFTQDASTPFINFDPNRCISCGACVAMCRQQSGHQAICFEPDSY
LALPQEMAASHSRQAPRAGFSATMADSQCVQCGNCVQVCPTGALTDARDKRQGVKHELKQ
TSTVCTYCGVGCRVIIHSDPVTGEIKRVSGDNRSQVNEGMLCVKGRFGFDFINSQQRLTQ
PLLRKDGELVPVSWNEAIDYIGTQLGRIKAEHGGDTIAGLASAKATNEDNYLFQKLFRSV
IGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIRSSDLIFILGSDTEAAHPIIASK
IKQAVSQHGARLVVADPKRVSIADSAELYLRHRPGSDVMLLNAIMQEIIKQGWHDSDYIS
RRVEGFDALRAEVMKDDYSLSNAAKITGVDAEEIAQLARMIGTAEKTAIYYAMGITQHTS
GHDNVTAIANLQLLCGNIGVEGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDPEVQA
AFRQAWQQEWLPDQIGLAATEMMHGLAHGRLKALYVMGENPVLSDPDQAHVMQGLESAEL
LIVQDIFMTETAQLADVVLPAASFAEKPGHFTNTERRVQRLQAAIDSPGLARRDWQIITD
IAKALGAAWRYEDEESIWQELTRVTPQYRGIQWQNTDPSTPQGLLGKHWPCPEPGHEGTR
LMHRERFTRGLGKMTPVGYRLPAELPCEDYPFTLSTGRLLEQFHTGTLTRKTDGLNTLGS
PRVMMSAIDADRLGVNNGDVLTLSTRRGSINIAAFVTRRAQPGVLFLPFHFAEAAANKLT
NNVLDPVAKIPEFKICAVRVEKASEAICWP
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatagaactcaccttcgacggccaagtcgtcaaagccaaccggggcgaaaatctgctc
acctgtgccaaggccgcaggcatagcgatccctaatttatgtcatctgggcaagcaactg
gacgacaaactcgcgggcaagcaagactgcaacctctgctatgtcgaggtgcgagacgaa
aagggcgacctccacacagtcaaggcctgtaagacacaggtcgaggcaccgctcgaggtg
atcactcactcggccgccctcagcaaacgccgccaggcggcgctgaaacaccttttgagc
gaccacttcgccgactgcgaagccccctgccaacaggcctgccccgccggcgtagacgtg
cagtcctatctgctgcatatcgcccagggcaaccataaggaagcggtcaaggtgatcaaa
cagactctgccgctaccgctctctatcggccgtgtctgcccggccttttgcgaatcggcc
tgtcgccgcggcgagttggatgagcccctggccattcgtcagctcaagcgtcacgccgcc
gacctggatctggacagtgaagacacctatgtgccgcccaaggcgcccgctaccggcaaa
cgcgtcgccatcataggcagtggcccggcggggatcagcgcgggttactacctctccaat
tcaggccatgaggtgaccattttcgagtccatgcctaaggcgggcggctggctaagatac
ggtatccccgagtaccgtctgcccaagcagatcctggacagagagatagacctactgtgt
cagaatggcctagtgatacagacagaaactcgtctcggccgcgacatccacctcaaggag
atggttagccaattcgacgctgtctgtctcgccatcggcgcccagaaggcggtgcccatg
aactacccgggtgtagacctcgaaggttgctacttgggggtggattaccttaaggaccac
tgcacagacaacaactaccaaacgggcaagaaggtggcggtgatcggcggcggcaacacc
gccatcgactgcgcccgtaccgcgctgcgcaagggcgccgaggtgactttggtctatcgc
cgtacccgcgacgagatgccggctgaggtctatgagatagaggaggccgaacatgagggc
gtgcgcttctatttcctcaccaaccccatcgaaaaccacggcgacgccaacggccgtatc
aatgccgtcacctttgagaagatgcgcctgggcgaacccgatgcctccggcagacgctca
ccccaggccacgggcgagaccttcaccgaggcgttcgatactgtgatcccggccgtctcc
cagaccccggacatgaccttcctcgagcatccagagagccaactctccaccggcgaggtg
gccctgacccgctggaacaccttctccggctgtgaacatactatgtccagtggagtagag
aagctgttcgtactcggggattcgcgcaccggccctgccacggccgtcgccgcggtggcc
gatggtcgcaaggccgccaatgccatcgagaaactgctgagcggcgagctgagctgtgag
ctgacacccgcgcccttcaactcccagaagcaagatgagcagaagccagacagccgtcac
ttcccggcccgtctgctacaggccaaggccaagatgccggaactggccatcaacaagcgc
ctagataatttcgacgagattgaactcggcttcaacgatgaggaggcgatgctcgaggcc
gcccgctgcctggagtgtggctgtcaggccaacactgaatgtgccctgcgcgactacgcc
accgagtaccgtgtcgatggcgccgcgctcgataaacagggccaccgcgcctttacccaa
gatgccagcacgccttttatcaacttcgaccccaaccgctgcatcagctgcggcgcctgc
gtcgccatgtgccgccagcagtctggccatcaggcgatctgcttcgagcccgacagctat
ctggccctgccccaggagatggccgcctcgcacagccgtcaggcgcctcgcgccggattc
agcgccaccatggccgacagccaatgcgtccaatgcggtaactgtgtccaggtctgcccc
acaggggcgctaaccgatgccagagacaagcgtcagggggttaaacatgagctaaaacag
acctccaccgtctgcacctactgcggcgtaggctgccgtgtcatcatccatagcgatccc
gtcacaggtgagatcaaacgggtatcgggcgacaaccgctcccaggtcaacgaggggatg
ctctgcgtcaagggccgcttcggattcgacttcatcaacagccagcaacgtctgacccag
ccgctgctgcgcaaagatggcgagctggtaccggtcagctggaatgaggcgatcgattac
ataggcacccagctgggtcgcatcaaggcagaacatggcggcgacaccatcgccggcctg
gcctcagccaaggcaaccaacgaagataactatctgttccaaaagctgtttagaagcgtt
atcggcaccaacaacatagatcactgcgcccgcctgtgtcatgcctcgacggtcaccgcc
ctgcaagaaagccttggcagcggcgccatgaccaatgatattccgtcgatcagatcctcg
gatctcatcttcatccttggctcggataccgaggccgcccaccccatcatcgcctctaag
atcaaacaggcggtgagccaacacggcgcccgcctggtggtggccgaccccaaacgggtg
agcatcgccgacagcgccgagctctacctgcgtcaccgccccggcagcgacgtcatgctg
ctcaacgccatcatgcaggagatcatcaagcagggctggcacgacagcgactacatcagt
cgccgtgtcgaaggattcgacgcacttcgcgccgaggtgatgaaggacgactacagcctg
agtaacgccgccaagatcacaggcgtcgacgcagaggagatagcccagctggcccgcatg
ataggcacagcagagaagaccgccatctactatgccatggggatcacccagcacacctcg
ggacacgacaatgtcaccgccatcgccaacctgcaactgctgtgcggcaacataggggtc
gagggcgcggggatcaacccgctgcggggccagagcaatgtccagggcgcctgtgacatg
ggcgccctgcccaactacttcaccggctaccagaaggtcaccgaccccgaggtgcaagcc
gccttcagacaagcctggcagcaggagtggctaccggatcagataggcctggcggccacc
gagatgatgcacggcctggcccacggcaggctcaaggccctctatgtgatgggagaaaac
cctgtactgagcgatcccgaccaggctcatgtgatgcaagggctggagtcggccgagctg
ctgatcgtccaggatatctttatgacggagacagcccagctggccgatgtggtgttgcca
gccgccagcttcgccgagaagccaggccactttactaataccgagcgccgggtgcagcgc
ctgcaggcggcgatcgacagcccaggcctagcccgccgcgactggcagatcatcacagat
atcgccaaggcccttggcgccgcctggcgctatgaggatgaagaatcgatctggcaggag
ctgacccgcgtcacgccccagtaccgcggcatccaatggcagaacacagaccccagcacg
ccacaaggcctgctgggtaagcattggccctgccccgagcctggccatgagggcacccgc
ctgatgcatagagagcgctttacccgcgggctcggcaagatgactcccgtcggctaccgc
ctgccggccgaactgccctgcgaagattaccccttcaccctctccaccgggcgcctgctg
gagcagttccacaccggcaccctgacccgtaagacggacggcctcaataccctgggatcg
cctagggtgatgatgtcggccatcgacgccgaccgtctgggggtgaacaacggcgacgtg
ctgactctgtccacgaggcgcggcagcatcaacatcgccgccttcgtcacgcgccgcgcc
cagccgggagtgcttttcctgcccttccactttgccgaggcggcggctaacaagctgacc
aacaatgtgctggaccctgtggccaagatccccgagtttaagatctgcgccgtcagggtc
gagaaggccagcgaggcgatctgctggccttag
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