Shewanella aegiceratis: K0H80_05165
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Entry
K0H80_05165 CDS
T09153
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K0H80_05165 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saeg03019
]
K0H80_05165 (rppH)
Messenger RNA biogenesis [BR:
saeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K0H80_05165 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QYJ83420
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All DBs
Position
1167659..1168183
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AA seq
174 aa
AA seq
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MIDSDGFRANVGIIICNRFGQVMWARRFGQHSWQFPQGGVDEGESAEQAMYRELYEEVGL
RPEHVQVLTSTRSWLRYRLPKRLIRQDSKPLCIGQKQKWFLLQLKSQESAIDLAASGHPE
FDDWRWVSYWYPVRQVVSFKRDVYRKVMKEFAPTALPFQAQENTQGGRRRGRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatagtgacggctttcgtgcaaatgtaggcatcattatctgtaatcgctttggg
caggtgatgtgggccagaagatttggtcaacattcctggcaatttccgcaaggtggcgtg
gatgaaggcgaaagcgccgagcaagccatgtatcgggagttgtatgaagaagttgggtta
aggcctgaacatgtgcaagtgttaacctcaactcgttcctggttgcgttatagattacct
aaacggttaattaggcaagacagtaaacccttatgtatcggacagaagcagaagtggttt
ctattacaattgaagagtcaggagtctgccatcgatctggcggcaagcggtcacccggag
tttgatgactggcgttgggtcagttactggtatccggtcagacaggtggtatcctttaaa
cgagacgtgtaccgcaaggtaatgaaagagtttgcgccgacggccttgccgttccaagcc
caggaaaatactcaaggcggtagaagaagaggtcgccgcaggtag
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