Shewanella aegiceratis: K0H80_05390
Help
Entry
K0H80_05390 CDS
T09153
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H80_05390 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_05390 (nfo)
Enzymes [BR:
saeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
K0H80_05390 (nfo)
DNA repair and recombination proteins [BR:
saeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
K0H80_05390 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QYJ83463
LinkDB
All DBs
Position
complement(1213120..1213971)
Genome browser
AA seq
283 aa
AA seq
DB search
MPDTHWVGAHVSAAGGIANAPLNAQKIGANAFALFTKNQRRWQAAPLCPSQIDAFKANCE
QANIRPDAILPHDSYLINLGHPDEEQLARSREAFLDEMQRCEQMGLTLLNFHPGSHLNKI
DIDECLARISESINLALDKTQGVSAIIENTAGQGSNLGHSFEQLAQIIDKVEDKSRVGVC
IDTCHMFAAGYDLTTFEACEESFGQFDAIVGNHYLKAMHLNDSKTPLNSRVDRHHSLGAG
YIGMDAFSYIMKHPATRQIPLILETIEPESWQQEINWLRSQTR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccagacactcattgggtcggtgcccatgttagcgccgccggtggtatcgccaacgcg
ccgctgaacgcacagaagataggtgccaatgcctttgccctgttcaccaagaatcagaga
cgctggcaggcggcgccgctctgcccttcgcagattgatgccttcaaggccaactgtgag
caggccaatattcgccccgatgccattctgccccacgacagctacctgattaatcttggc
catccagatgaggagcagctagcgcgctcgcgagaagcctttctcgacgagatgcagcgc
tgcgaacagatggggttgaccctgctcaactttcatcccggtagtcatctcaacaagata
gacatagacgagtgcctggcccgcatcagcgaatcgatcaatctggcactggacaagacg
caaggcgtcagcgccatcatagaaaacaccgcaggccagggctcaaacctgggccatagc
ttcgagcagcttgcacagatcatcgacaaggtagaagataagagccgagtcggtgtctgt
atcgacacctgccacatgtttgccgccggctacgatttaaccactttcgaggcctgcgag
gagagcttcggccaatttgatgccatagtgggcaaccattatcttaaggcgatgcacctc
aatgacagcaagacaccgcttaatagccgggtcgacaggcaccactccctcggcgccggt
tatataggtatggacgcctttagctatatcatgaaacatccggcgaccaggcagatcccc
ctcatattagagacgatagaacctgagagctggcagcaagagatcaactggctacgtagc
cagacacgctaa
DBGET
integrated database retrieval system
