Shewanella aegiceratis: K0H80_06055
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Entry
K0H80_06055 CDS
T09153
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
saeg
Shewanella aegiceratis
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saeg03021
]
K0H80_06055 (rpoS)
Transcription machinery [BR:
saeg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K0H80_06055 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TrmB
HTH_IclR
Put_DNA-bind_N
Motif
Other DBs
NCBI-ProteinID:
QYJ83585
LinkDB
All DBs
Position
1373321..1374295
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AA seq
324 aa
AA seq
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MGRKQSTAVAEPLVDLSKNESDLSVTNSKEVLKDAELEQQVQDDLQKNLDATQLYLSEIG
FSPLLSAEEEVYFSRKALKGCEKSRNRMIESNLRLVVKIARRYNNRGLALLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTARELA
HKLDHEPTAEEIAEQLDLPSSDVSKMLKLNERITSVDTPLGGDNDKALLDVLADDDCVGP
DYKVQDDDMSKSVVRWLDELNSKQREVLARRFGLLGYEPSTLENVGKEIGLTRERVRQIQ
VEALKRLRDLLSAQGLSVEAIFRV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtaaacaatctaccgccgtggcggagcccttagtggacttgtctaagaatgag
tctgatctatcagtgaccaacagcaaggaggttttgaaagacgcagaactagaacagcaa
gtacaagatgacttacaaaagaacttagatgccactcagctgtatttaagtgaaattgga
ttttcccccctattgagtgcggaagaggaggtttatttttcacgtaaggccctaaaaggc
tgtgaaaaatctcgcaaccgtatgattgagagtaatctcagactcgtcgtaaaaattgca
cgtcgttataacaatcgtggtttagccttactggatctgattgaagaaggtaacttaggt
ttgatccgcgccgtcgaaaagttcgatcccgaacgcggcttccgtttctcaacctatgcc
acctggtggatccgccagaccatagaacgtgccatcatgaaccaaacccgtaccattcgc
ctgcctattcatgtggtaaaggagctcaatgtttaccttcgcaccgccagggaactcgcg
cacaagctagatcatgagccaaccgcagaagagatcgccgagcagttagacctgccaagt
agcgatgtcagtaagatgctcaagcttaacgagcgtatcacttcagttgataccccactg
ggtggcgacaacgataaggcactgcttgacgtattagccgatgacgattgtgtgggcccg
gattacaaggtgcaagacgatgatatgtctaagtctgttgtgcgttggctcgacgagctg
aacagcaagcagagagaagtacttgcccgtcgtttcggtctgcttggttatgagccatcg
accctggaaaatgtcggtaaagagataggcctcacccgagagagagtacgccaaattcag
gtggaagccctgaagcggcttagagatctgctcagtgctcaaggattatcggtagaagct
atcttcagagtgtaa
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