Shewanella aegiceratis: K0H80_06430
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Entry
K0H80_06430 CDS
T09153
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
saeg
Shewanella aegiceratis
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saeg03009
]
K0H80_06430 (der)
Ribosome biogenesis [BR:
saeg03009
]
Prokaryotic type
GTPases
K0H80_06430 (der)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
Roc
AAA_22
SRP54
Ras
AAA_24
NTPase_1
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QYJ83650
LinkDB
All DBs
Position
1447195..1448664
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AA seq
489 aa
AA seq
DB search
MIPVVALVGRPNVGKSTLFNRLTRTRDALVADYPGLTRDRKYGRAHLSGYEFIVVDTGGI
DGTEEGIETRMAEQSLAAIEEADVVLFLTDARAGLTAADEAIAEHLRRREKTTFVVANKV
DGIDADSACGEFWALGLGEVYQMAAAQGRGVTNMIEYALTPYAEAMGLTRDGEDEEEADE
RQYTEEEAEAEQQRLQDLPIKLAIIGKPNVGKSTLTNRILGEERVVVYDEPGTTRDSIYI
PLERDGQEYVIIDTAGVRRRSKVHETVEKFSVIKTLKAVEDANVVLLVVDAREGIAEQDL
GLLGFALNAGRALVIAVNKWDGIDQDVKERVKSELDRRLGFIDFARIHFISALHGTGVGH
LFESVEEAYESATRRVSTSMLTRIMQMAQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVIH
GNQVKKLPDSYKRFMMNYYRRSLKVMGTPIQVRFQEGGNPFEGLNTKKLTVSQERRRKRM
MSHIKDKKK
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgattccagttgtggccctggtaggccgaccaaacgtaggtaagtcgaccctgttcaat
cgtcttacgcgcaccagagacgccttggtagctgactacccaggtctgactcgggatcgt
aagtatggtcgtgcacatctatctggttacgaatttatcgtggtggataccggcggtatt
gatggcaccgaagaggggatcgagacccgcatggcagagcagtcgctggcggcgatcgaa
gaagccgatgtggtgctcttcctcaccgacgcccgcgcgggtctgacggccgccgacgag
gcgatcgccgagcatttacgccgccgcgagaagaccaccttcgtggtagccaacaaggtc
gatggtatcgacgccgactctgcctgtggcgagttctgggccctgggcctgggtgaggtc
taccagatggctgccgcccaagggcgcggtgtgaccaacatgatcgaatacgcgctgaca
ccttacgccgaagccatgggactgacccgtgacggcgaggatgaagaggaagccgacgag
cgtcaatacacagaggaagaggccgaggccgagcagcagcgtctgcaggacttgccaatt
aagctggcgattatcggtaagcctaacgtgggcaagtcgaccctgactaaccgtattctg
ggtgaagaacgtgtcgtggtctacgatgagccgggtacgacccgtgacagtatctatatc
ccgctggagcgcgacggtcaggaatatgtgatcatcgacaccgcgggtgtgcgtcgtcgt
agcaaggtgcacgagacagtcgagaaattctctgtgatcaagaccctcaaggcggtagaa
gatgccaacgtggtgctcttggtggtcgatgcccgcgaggggatcgctgagcaagactta
ggtctgctgggcttcgccctgaacgcgggtcgcgccctggtgatcgcggtgaacaagtgg
gacggtatcgatcaagacgtgaaagagcgcgtgaagagcgagcttgaccgtcgtctgggc
tttatcgattttgctcgtattcacttcatctcggcgctgcacggcacgggtgtgggtcac
ctgttcgagtcggtagaggaagcctacgagagcgccacgcgccgcgtgagcacctctatg
ctgacccgcatcatgcagatggctcaggacgatcaccagccgccgctggtgaacggtcgc
cgcgttaagctcaaatacgcccacgccggtggttacaacccgccaatcgtggtgatccat
ggtaaccaggtgaagaagctgcccgattcttacaagcgcttcatgatgaactactaccgc
cgttcactcaaggtgatgggtacgccgattcaggtacgcttccaggaagggggtaacccg
ttcgaaggcctgaacaccaagaagctcaccgtgagccaggagcgtcgccgcaagcgcatg
atgagtcacatcaaagacaagaagaagtaa
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