Shewanella aegiceratis: K0H80_11395
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Entry
K0H80_11395 CDS
T09153
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03030
DNA replication
saeg03430
Mismatch repair
saeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H80_11395 (dnaX)
03430 Mismatch repair
K0H80_11395 (dnaX)
03440 Homologous recombination
K0H80_11395 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saeg03032
]
K0H80_11395 (dnaX)
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_11395 (dnaX)
Enzymes [BR:
saeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H80_11395 (dnaX)
DNA replication proteins [BR:
saeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0H80_11395 (dnaX)
DNA repair and recombination proteins [BR:
saeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0H80_11395 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
AAA_16
RuvB_N
PIF1
AAA_14
ResIII
AAA_2
AAA_assoc_2
TsaE
AAA_18
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QYJ80943
LinkDB
All DBs
Position
complement(2567138..2570458)
Genome browser
AA seq
1106 aa
AA seq
DB search
MSYQVLARKWRPATFEQVVGQSHVLHALTNALSQNRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEQGVTATPCGQCASCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTL
DEICVQLGHILAQEQVGYDDGAVKLLAKAANGSMRDALSLTDQAIAFGAGQVRLTQVQTM
LGTIDEHHVIVLLKALCDGDVDQLMKVTGDVLSFGADPHEVLRSLLELLHQITLTQFAPS
AAQLSQYAEQIKAFAKQLRPEQVQLYYQLLLNGRQDLPHAPDPKSGLEMALLRAIAFVPE
APVQRWMGEAGSEILLPEPLLPEPGKGEDVAPISAKPDETVKPVKPAASVSNSQGEVEAE
VEEKTKVEEKAKIEASSKASAAMFSQDDAQATAEQTKKLNDTDGPIEADLVEADLVAADL
FEADSAEQEELEEDEGALDLFAEQQLILSQAQSQGHSPELSTNHSPEPSTEPVSSLEPSS
QETSSANKSPVSEASADSKADVSTSAATAQGGEAVQPSELKMPAETVEQTASIAEQAASS
ANESGSFYDDLYFSSDGDESGDPSDYEAYLAYQQGQDSQASGDISSSAATRPVDNSAQAS
ASVNEDAPHGGLTPDTASPNEETTSNLLEDDLLDAVLNARQSLLSDLEEDAAKEDAAKES
ASKKPLVGAKKPGANQVQPSSEQLTGEENKFGAEPYVPPKRPEQAALSGEKAALSGNDEA
PSVGENALSGEATPQSFGETAQNDQDNALSVEAVSNMTAMTEPGTDASETQNNNSAQQPT
AYLNDEDRPPWVAPEPSQQAVTAPSDDAPNLAGQVDTQSESHARADAVAQTEQGLDARSL
EDHSSDDQSPNESAAFGNHPVQRPAAQESSASSAVTEPVSQTTRVAFVTDEITGHDTDLK
WYRLMSALEIGGRVRQLAVNAVCQAFSEPLPLVLKPNQKHLAAPGAITQLEDALSKALGG
SCQVAFSVGVEPERETPLEIRQRFHRELLEQAHQGLLQDENIQWLTQMMQAEMEPDSLSY
LPELLGKRGQTIALIDKSNFVATEES
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaggtgttagccagaaaatggcgccctgcaacatttgagcaagttgtcggt
cagtcacatgtgctgcatgcccttaccaatgccttatcgcaaaaccgtctacatcatgcc
tatctgtttaccggtacccgaggggtaggtaagacgagtctggccaggctatttgccaag
ggattgaattgtgagcaaggagtaacggccacgccctgtggccagtgtgccagctgcgtc
gagatcgcccagggtcgctttgtcgatcttatcgaggtggatgcggcgtcgcgcactaag
gttgacgacacccgcgagctgctggacaacgttcagtatcgccccacacgtggccgcttc
aaggtgtatctcatcgatgaggtgcacatgctctcgcgcagcagcttcaatgccctgttg
aagacgctggaagagccccctgagcatgttaaattcttgctggcgaccacagatccccag
cgtctgccggtcaccgtactctcccgctgtctgcaatttaaccttaagagtctgacactc
gatgagatctgcgtgcagcttggccacatcctggcgcaggagcaggttggctatgacgat
ggcgcggtaaaactactcgccaaggcagccaacggcagtatgcgtgacgccttgagtctg
acggatcaggccatcgccttcggggctggtcaagtcaggctcactcaggtgcagaccatg
ctgggcaccatagatgagcatcatgtgattgtcttgctaaaagccctgtgcgatggcgat
gtggatcagctcatgaaggtgactggggatgttttatccttcggcgccgatccccatgag
gttttgcgcagcctgctggaactgctgcaccagatcaccttgacccagtttgcgcccagc
gccgctcagctgtcgcaatatgccgagcagatcaaggccttcgccaaacagttaaggccc
gagcaggtacagctctattatcaattattgctaaacggtcggcaggatctaccccatgcg
cccgatcctaagtctggcctagagatggcgctattgcgcgctatcgctttcgtgcccgag
gcgcccgtgcagcgctggatgggcgaggccggtagtgagatcctcttgcctgaacctctc
ttaccagaaccgggcaagggtgaagatgttgcgccaatctctgctaagccagatgaaaca
gttaagccggtaaaacctgctgcgtctgtgtcaaacagtcagggcgaagtggaagccgag
gttgaagaaaagactaaggtagaagaaaaagctaagattgaggccagcagtaaagcaagt
gcggcaatgttttctcaagacgatgcacaagcaactgctgagcagacgaaaaagttaaac
gatactgacggcccaattgaagcggatttagtcgaagcggacttagttgcagcggattta
ttcgaagcggattcagctgagcaggaagagcttgaggaggatgagggcgcactcgatctg
tttgccgagcagcagctgatcttgagccaggcccaaagccaagggcacagccctgagctt
agcactaaccacagccctgagcctagcactgagcctgtgtctagccttgagccgagctcg
caagaaacaagctcggcaaataagagtcccgtaagcgaagcatctgccgattctaaagcg
gatgtgtcgacgagtgctgcgacagcacaaggcggtgaagcggttcagcctagcgagcta
aaaatgccggcagagaccgtcgagcaaacagcttcaatagccgagcaagctgcatcatcg
gcaaacgagagtggcagtttttacgatgacctctatttcagttcagatggcgatgagtcc
ggcgacccaagcgactatgaagcctaccttgcctatcaacagggccaggatagtcaggca
tctggtgatatctcttcctctgcggcaacaaggcctgttgacaacagtgcccaggctagc
gcttcggtaaatgaagatgccccccatggcggcttgacgcccgatacagcatcgccaaat
gaagaaacaacgtccaacctgttagaagatgatctgctcgacgccgtattgaacgcgcgt
cagagcctgcttagcgatcttgaggaagatgcggctaaggaggacgcggctaaggagagc
gcatcaaaaaagcctctagtcggcgctaagaagcctggggctaaccaggttcaaccgagt
agcgaacagctgacgggcgaagagaacaagtttggcgcagagccttatgtgccacccaaa
cggccagagcaagcagccctgagcggagaaaaagcagccctgagcgggaatgatgaagcc
ccgagcgtaggtgaaaatgccttgagcggggaagctactccccagagctttggtgagaca
gctcagaacgatcaagataatgccttgagcgtcgaagctgtctcgaacatgactgcgatg
acggagcctgggacggatgcgtctgagacgcagaacaataattctgcgcagcagcctact
gcatacctaaatgatgaagacaggccgccttgggtggcgcctgagccgagccagcaggca
gttactgccccaagcgatgacgcgcctaatcttgctgggcaagttgatactcaatctgag
tcacacgcccgcgccgatgcagttgcccagactgaacaaggcttggatgctcgcagcttg
gaggaccatagctcggatgaccaaagcccaaatgaaagcgctgctttcggcaaccatccc
gtccagcgccctgcagcgcaggaatcttctgcatcttcagcagtaaccgagcccgtcagt
cagacgacccgggtggcctttgtgactgatgagatcacagggcacgatacggatcttaag
tggtaccgcttgatgtcggcgctggagatcggcggccgggtaagacagctggcggtcaac
gccgtatgtcaggcctttagtgagccgctgcctttggtgctcaaacccaatcagaagcac
ttggcggcgccaggcgccatcacgcagctcgaagatgccttgtcgaaggccttgggcggc
agttgccaggtggcgtttagtgtcggcgtcgagccggagcgcgagacgccgctagagata
cgtcagcgttttcatcgcgagctgctcgagcaggcgcatcaggggttattacaagatgaa
aacattcaatggttgacacagatgatgcaggcagagatggagccagatagcttaagttat
ctgccagagctgctgggtaagcggggccagacgatagcacttatcgataagtcgaacttt
gtggcgacagaggagtcttaa
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