Shewanella aegiceratis: K0H80_12100
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Entry
K0H80_12100 CDS
T09153
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03030
DNA replication
saeg03430
Mismatch repair
saeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K0H80_12100
03430 Mismatch repair
K0H80_12100
03440 Homologous recombination
K0H80_12100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saeg03032
]
K0H80_12100
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_12100
Enzymes [BR:
saeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K0H80_12100
DNA replication proteins [BR:
saeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K0H80_12100
DNA repair and recombination proteins [BR:
saeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K0H80_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
QYJ84433
LinkDB
All DBs
Position
complement(2724757..2725434)
Genome browser
AA seq
225 aa
AA seq
DB search
MAGIKVRSQLCWRALKAKDAGLKAYQQALMPVIDKSFAEAELLAIDLEMTGLNASFDQIL
SIGVVPIRQGQLILSEAQHKLVQIEGSVGQSATIHGILDTHLDAALTPEQAMAWFLSVSE
GKVLVAHHAPLDLAFLQSGLQACLGEKPRLLAIDTLLLEKQRLLRQQEHLQEGCLRLGRS
RARYGLPVYAAHNALIDALACGELLLAQVAAMGGATKVKIAELLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ctggcagggattaaggtcaggtcgcagctctgttggcgagccctgaaggcaaaagatgcc
gggctcaaggcctatcagcaggcgttgatgccggttatcgacaagtcattcgctgaggcg
gagctgctggccatagatcttgagatgacagggcttaatgccagcttcgatcagatcttg
agtatcggcgtggtgcctatccgtcaggggcagcttattctcagcgaggcgcagcacaag
ttggtgcagatagagggcagcgtcggccagagcgccaccatacacggcatcttagacacc
catctggatgcggccttgaccccggagcaggcgatggcctggtttttatccgtgagtgaa
ggcaaggtgttggtggcccaccatgcgccgctggatctcgccttcttacaatctggcctg
caggcctgtttgggagagaagccgcgcctgctagccatcgataccttattgctagagaag
cagcgactgctcagacaacaggaacatctgcaagagggctgtctgcgcctggggcgcagc
cgcgcccgatatggtctgcccgtgtatgccgctcataacgcactcatcgacgcgctggcc
tgcggcgagttgctgctggcgcaggtggcggccatgggcggcgcaactaaggtgaagatc
gccgagctgctgccttaa
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integrated database retrieval system
