Shewanella aegiceratis: K0H80_16355
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Entry
K0H80_16355 CDS
T09153
Name
(GenBank) PAS domain S-box protein
Organism
saeg
Shewanella aegiceratis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_9
PAS_3
MCP-like_PDC_1
HATPase_c
PAS
HisKA
PAS_4
PAS_8
dCache_1
Hpt
Diguanyl_cycl_sensor
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
QYJ84482
LinkDB
All DBs
Position
complement(3759995..3765301)
Genome browser
AA seq
1768 aa
AA seq
DB search
MDMSRLRTFRSRIIVQIALPLIAIMAMVLSLIAWFNYRAEESYLYGDLEKQAEMVASRVH
HFLSFAEKDTRTFADLLGQMSRDQLLEQGGELKALLTRRLERQSDFYASAIAFRPSLTAN
QQSYAPYVYRDQDGVKFLDIGADSYDYTDGQWAWWSEAIDKPQGYWSLPYFDEGAGNILM
ITFSQPFGPSSPYWGVVTVDLALDALPAMAGIDADRMLVLDDKGRLIYHKDAQLLMSQGT
DKWLAPSNDNGDFITLLQSAKSGNSRMLAADGQAYLASVGVVPKLNWRVVIMTQEDKLSH
QLYMGLSSLVLTLLLISAVLYLTGYLTARRLSLPIERLAAGIVAFGAGKTKHIEGTRGAV
TEVETLTDKFNELAEVLAQREQALLDSRGNRFAKLIDGMSDKSFYCSLEPDGQIAQVSAG
VEKVLGVSPDLLKRKYQRMFSDNPINEANWEYMDSALQGNSVPPHQVEMIAANGSVRRLD
LFMQPLLSDNGELLSIEMLFNDVTEQFSAAAWSNAVLESAPEAMLIVDEQGQVVFSNSCC
QQLFGFDAQQMLALNVDQLVPDSVKHHEALRAKFIGEGVDRRMGLGLGKTLKAKKADGSL
FPVEISLGLLPADSDGLRQVAASIRDMTEELATAKRIKDSESRFRGLVGNIPGAVYRTRL
GEQWVMEYVSDNIAEITGYPAADFIENKKRVFASLILEADREATDTAINKGIAEQQSFEV
QYRIHHRDGSLRWVHEKGKASYDDEGNALWFDGSIQDVTQSKLAQEKIAQSQQQLETITE
SIPNTVYQLRWIANDQRYFTFLSRACITTLGFHRDQLLANFDLVADCIIESERARIIRAL
SGESASGLKWIEEFRYQHPTGEQRWLQAGARGDRQDDGSIVWNGYLMDISERKQMDRELA
KREAHFRALFDNAGIGIVNVDDRGVILDCNEQFSQYLQLPIERLKGSLFFDYQDPEQGLE
AKNSFKHLMSDGADSVKLEIRLLNQAGEARWMDVNMTGLSDKQGEYRSAVLSMADISSLK
LLSEELTQAKDVADAASKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTSLDKKQQNYVEK
IDRASKSLLGIINDILDFSKIEAGKLDIEAVPFQLDTMLEDLSDMFSVKAADKQLELLFA
VAPNIPRHLVGDPLRLSQVLINLMNNAIKFTEQGEVMLSISQLVREDEEILLKFSVRDNG
IGLTEEQRGKLFQSFSQADSSTTRKYGGTGLGLAICKQLVELMGGEIGVESQFGNGSTFF
FSVRFKVADNQLIKVAQELEGMRILVADDNATARDILRSTLESMGFTVDTVRSGAEALSR
CQETDYGVALIDWRMPEMDGLETARRLLSERANPPKTLIVSAHADGDFIDKAEQAGISGY
ITKPISASRLLDGIMSALGKQGAMPVRRKGSEISPALLAQLKGKRILLVEDNEMNQEVAS
EFLEQVGVILSIAENGQVALEKLAMQSFDLVLMDCQMPVMDGYQATAELRKRPELADLPV
IAMTANAMAGDKEMCLRAGMNDHIAKPIEVSLLYKTLLEYLGDDSQVIEETSTEQTHQHS
QDAYWPQHPALDIDKGLQLVQNSARLYRRIFERFYTGQSRCAELIATAQREGKQEEAVRY
AHTLKGVAGNLCCPELVTLAKQVEQTLSDSIQADVTEALTQMGELLDSLCATIGDWLSQT
GAETLPQEDGTEPGAATDAPAMSAQELDAAIKELLKMLEEADAEAVEKLQAIRDRLPKSL
ANKIAPVLNMVNAYQFDEAIELVEEIFS
NT seq
5307 nt
NT seq
+upstream
nt +downstream
nt
atggacatgagcagacttcgtacctttcgtagccggataatcgtacagattgccttaccc
cttatcgccatcatggccatggtgttgagcctgatcgcctggtttaactaccgggccgaa
gagagctacctctatggcgatctcgagaagcaggccgagatggtggccagcagggtgcat
cattttctctccttcgccgagaaggatacccgcacctttgccgacctcttaggccagatg
agtcgcgatcagctgctcgagcaaggtggcgagctcaaggcattgctgacccggcgcctg
gagcgccaaagcgacttctatgccagcgccatcgcctttcgccccagcctgacggctaat
cagcagtcctatgccccctatgtctaccgggatcaggacggcgtgaagttcctggatatc
ggcgccgacagctatgactacaccgacggccaatgggcctggtggagcgaggcgatagac
aagcctcagggctattggtcgctgccctatttcgacgagggtgccggcaacatcttgatg
atcaccttctcccagcccttcggcccctcaagcccctattggggcgtggtgacagtggat
ctggccctggacgctctgccggccatggcggggatcgatgccgatcgcatgctggtgttg
gatgacaagggacggctgatctaccacaaggatgcgcagctgctgatgtcccagggcaca
gataagtggctcgccccatcaaatgacaacggcgacttcatcaccctgctccagtcggct
aaatctggtaacagccgcatgctggccgccgatggtcaggcctatcttgccagcgtgggc
gtggtgcctaagctcaactggcgggtagtgatcatgacccaagaggacaagctctcccat
cagctctacatggggctctcctctctggtgcttactctgctgctgatctccgccgtgctc
tatctaacgggttatctcaccgccagacgcctgtcactgcccatcgagcgtctggccgcc
ggcatagtggccttcggcgccggtaagaccaaacatatcgaaggcacccggggcgcggtg
accgaggtggagaccctgacggacaagtttaacgagctggccgaggtgctggcccagcgc
gagcaagcgctgctggattcacgcggcaatcgtttcgccaagctgatcgatggcatgagt
gacaagtccttctactgctcgctggagcccgatggtcagatcgcccaggtctctgccgga
gtggagaaggtgttgggagtcagcccggatctgctcaagcgtaaatatcagcggatgttc
tccgacaaccccatcaatgaggcgaactgggagtacatggacagcgccctgcagggcaat
agtgtaccgccccaccaggtggagatgatcgccgccaacggcagtgtgcgtcgcctggat
ctcttcatgcagccgctattgtcggacaacggcgagctgctctccatcgagatgctgttt
aacgatgtgaccgaacagttctcggcggcggcctggtctaacgccgtgctggaatcggcc
cccgaggctatgttgatcgtcgacgagcagggccaagtcgtcttcagcaacagttgctgc
cagcagttgtttggctttgatgcccagcagatgctggcgctgaatgtcgaccagctggtg
cccgatagcgtcaagcatcatgaggccctaagagccaagtttatcggcgaaggggtggat
cgtcgcatgggtcttgggctggggaagacgctcaaggccaagaaggccgacggcagcctg
tttccggtggagatcagccttgggctgctgcccgccgacagcgatggactgcgccaggtg
gcggcctcgatacgggacatgacagaagagttggccaccgccaagcggatcaaggacagc
gagagtcgtttccgaggcctggtgggcaacattcccggcgccgtctaccgcacccgatta
ggcgagcagtgggtgatggaatatgtcagcgacaacatcgccgagatcaccggctatccc
gccgccgactttatcgagaacaagaagcgggtctttgccagcctgatcctggaggcggac
agggaagccaccgacacggcgatcaacaaggggatcgccgagcagcagagcttcgaggtg
caataccgtattcatcaccgggatggcagcctgcgctgggtgcacgagaagggcaaggcc
agctatgacgatgaaggcaatgccctctggttcgatggcagtatacaggatgtcacccag
agcaagctggcccaggagaagattgcccagtcccagcagcagctggagacgatcactgag
tcgatccccaacaccgtctatcagctgcgttggatagccaacgatcagcgctacttcacc
ttcctctcccgcgcctgcatcaccaccctgggttttcaccgggatcagctgctggcgaac
ttcgacctggtggccgattgcatcatagagtcggagcgggcccgcatcattcgcgccctc
tccggcgagagcgcctctgggctcaaatggattgaagagtttcgctaccaacaccccacc
ggcgagcagcgctggctacaggcgggggccaggggcgatcgtcaggacgatggcagcata
gtctggaacggttacctgatggatatcagcgagcgcaagcagatggacagggagctggcc
aagcgcgaggcgcactttagggctctgttcgataacgcgggtatcggcatagtcaatgtc
gacgatcgcggcgttatcttagattgcaacgagcagttcagccaatacctgcagctgccg
atcgagcggctcaagggcagtctcttcttcgattatcaggaccctgagcaggggctcgag
gccaagaacagctttaaacacctgatgagcgacggcgccgacagcgtcaagttggagatc
cgtctgctcaaccaggccggcgaggccaggtggatggacgtcaacatgaccggcctgtcg
gacaagcagggggaatatcgctccgccgtgctctccatggcggatatcagctccctcaag
ctactctccgaggagctgacccaggccaaggatgtggccgacgccgccagcaaggcaaag
agcgactttttggccaacatgtcccacgagatccgcacgccgatgaacgccattatcggt
atgtcgcagctatgtctacagaccagtttggataagaagcagcagaactatgtggaaaag
atcgaccgcgcctccaagtcgctgctggggatcatcaacgacatcctggacttctccaag
atagaggcgggcaagctggatatcgaggcggtgcccttccagctcgataccatgctggaa
gatctcagcgacatgttctcggtcaaggccgccgacaagcagctcgagctgctgtttgcc
gtggcgcccaacattccccgccatcttgtgggggatccgctgcgactcagtcaggtgttg
atcaatttgatgaacaacgccatcaagtttaccgagcagggcgaggtgatgctgtcgatc
agccagctggtgcgcgaggatgaggagatactgctcaagttcagcgtgcgcgacaacggc
ataggcctcaccgaagagcagcgcggcaagctgttccagtcctttagtcaggccgacagc
tccaccacccgcaagtatggcggcaccggccttgggctggcgatctgcaagcagctggtg
gaactcatgggcggcgagatcggcgtcgagagccagttcggcaacggcagtaccttcttc
ttcagcgtgcgcttcaaggtcgccgacaatcagctgatcaaggtggcccaggagctggaa
ggaatgcggattctggtggccgacgacaacgccaccgcccgggatattctgcgcagcact
ctcgaaagcatgggctttactgtggatacggtgcgcagcggcgccgaggcgctcagtcgc
tgtcaggagaccgactatggggtggcgctgatcgattggcgcatgcctgagatggacggc
ctggagacggcgcggcgactgctgagcgagcgcgctaacccgcccaagacgctgatcgtc
tcggcccatgccgacggtgattttattgacaaggcggagcaggcggggatctcgggttat
atcactaagccgatcagcgcctcacgcctgttggacggcatcatgtcggccctgggtaag
caaggcgccatgccggtgcggcgcaagggcagtgagataagccccgccctgctggcgcag
ctcaagggcaagcgcatcctgctggtggaagacaacgagatgaaccaagaggtggccagc
gagttcctcgagcaggtgggggtgatcctctcgattgccgagaatggtcaggtggcgctg
gagaagctggccatgcagagcttcgacttggtgctaatggattgtcagatgccggtaatg
gatggctatcaggccaccgccgagctgcgtaagcgtcccgagttggcagacctgccggtg
atcgccatgacggccaacgccatggctggggataaggagatgtgcctgcgcgccggtatg
aacgaccatatcgccaagcctattgaggtgtcgctgctctacaagacgctgctggaatac
ctgggggatgacagtcaggtcatagaggagaccagcactgagcagacacatcagcacagt
caggatgcctattggccacagcacccggcgctggatatcgacaagggactgcagctggtg
cagaactcggcgcgtctctaccggcggatattcgagcgtttctatacgggtcagtcccgc
tgcgccgagcttatcgccaccgcacagcgtgagggcaagcaggaggaggcggtgcgttac
gcccacaccctcaagggggtggccggtaacctctgttgccccgagctggtgaccctggcc
aagcaggtggagcagacactcagcgattcgatccaggccgatgtgacagaggcgctgact
cagatgggtgagctgttagacagcctgtgcgccaccataggcgactggctcagtcagacc
ggggccgagacgctgccgcaagaagatggcaccgagcccggggcggctaccgatgcgcca
gccatgtcggcccaggagctggatgccgccatcaaggagctgctcaagatgctggaggag
gcggacgccgaggcggtggagaagctgcaggcgatccgcgatcgtctacctaagtcactg
gctaataagatagcgcccgtgctcaacatggtgaacgcctatcagtttgacgaggcgatc
gagctggtggaggagatctttagctag
DBGET
integrated database retrieval system
