Shewanella aegiceratis: K0H80_17275
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Entry
K0H80_17275 CDS
T09153
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saeg
Shewanella aegiceratis
Pathway
saeg03420
Nucleotide excision repair
saeg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0H80_17275 (uvrD)
03430 Mismatch repair
K0H80_17275 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_17275 (uvrD)
Enzymes [BR:
saeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K0H80_17275 (uvrD)
DNA repair and recombination proteins [BR:
saeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0H80_17275 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
K0H80_17275 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYJ82025
LinkDB
All DBs
Position
complement(3972961..3975126)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPQSSMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVSGSNMGRMWIGTFHGLAHRLLRTHYQDANLPQSFQILDSDDQL
RLIKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPIEQNLLKIYQVYQES
CDRAGLVDFAEILLRAHELWLNKPHILEHYQERFKNILVDEFQDTNAIQYAWIRVLAGST
ANVMIVGDDDQSIYGWRGAQVENLHRFLQDFPAAQTIRLEQNYRSSGNILNASNELIANN
PDRLGKKLWTEDKDGEKIGLYCAFNEMDEARFIVGRITDWQDMGGNLSDCAILYRSNAQS
RVLEEALLHKGMAYRIYGGLRFFERQEIKDAMGYLRLISNKNDDAAFERIINTPTRGIGD
RTLEILRSTARQQELTLWQTCLRLLDEKVLSGRAANAVRGFMDLIVTLQQETAEQSLHRM
TDHVIQASGLKAMYEAEKGEKARARVENLEELVTAARTFVMPEDLEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAGVEEGIFPSQMAMDEGDRLDEERRLCY
VGMTRAMKQLYITYAESRRIYGRENYARPSRFIKEIPGDYVQEIRMRTSVSAPASSNRFS
QAESAFNDSGFNIGQRVNHPKFGEGKVTNFEGSGAQARVQVDFLDVGSKWLVVAYARLET
L
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttactcgacggcttaaacgacaaacagcgcgaggccgtcggcgca
ccacaatctagcatgttggtgttggcgggcgcgggcagtggtaagacccgggtactgacc
caccgcatcgcctggctgatgcaggtagagcagcagagtccctattctattctggcggtg
acctttaccaacaaggctgcggccgagatgcgagagcgtgtggagaaggtgagcggcagc
aacatgggccgcatgtggatcggtaccttccatggcctggcccatcgcctgctgcgcact
cattatcaagacgccaacttgccccagagtttccagatcctcgactcggacgaccagctc
aggctgatcaaacggatccttaagagcctcaacctggacgagaagcaatatccgcctcgt
caggcccagggctatatcaatggcaagaaagatcaggggctgagacccaagcatatcgat
gccggcggcttccccattgagcagaatctgctgaagatctatcaggtgtatcaggagtca
tgcgatcgtgccggcctggtagattttgccgagatcttgctaagagcccatgagctttgg
ctcaacaagcctcatattctggagcactatcaggagcgctttaagaacatcctggtggac
gagtttcaggacaccaacgccatccagtatgcctggatccgcgtgctagctggcagcacg
gccaacgtgatgatcgtcggcgacgacgaccagtctatctatggctggcgcggcgcccag
gtggagaacctgcatcgcttcctgcaggacttccccgcggcccagaccatacgtctggag
cagaactatcgctccagcggcaacattcttaacgcctccaacgagctgatcgccaataac
ccggaccggctgggcaagaagctgtggaccgaagacaaggatggcgagaagatcggcctc
tactgcgccttcaacgagatggatgaggcccgcttcatcgtgggtcgcatcacagactgg
caggatatgggcggcaacctcagcgactgcgccatcctctatcgctccaacgcccagtcg
cgggtgttggaagaggccttgctgcacaaggggatggcctatcgcatctatggcggcctg
cgtttcttcgagcgtcaggagatcaaggatgccatggggtatctgcggctgatcagcaac
aagaacgacgacgccgccttcgagcgtatcatcaacacgccgacccgtggcataggcgac
cgtaccctggagatcctgcgcagcacggcgcgccagcaggagctgaccctgtggcagacc
tgtctgcgtctgctcgatgagaaggtgctctctggccgcgctgccaacgcggtacgtggc
ttcatggatcttatcgtcaccctgcagcaggagacggcggagcagtcgctgcatcgcatg
acagatcatgtgatccaggcctctggcctcaaggccatgtatgaagcggagaagggcgag
aaggcccgcgccagggtagaaaacttggaggagctggtcaccgcggcgcgcaccttcgtg
atgccggaagatctcgaagacatgggcgaattaaatgccttcctttcccacgccgcactc
gaggcgggcgagggccaggccgatgccttcaccgacgccgtgcagctgatgaccctgcac
tcggccaagggtctagagtttcccatggtgttcatggcaggcgtcgaggaggggatcttc
cccagccagatggcgatggatgagggcgataggctggatgaggagcgccgcctctgttac
gtgggcatgacccgcgccatgaagcagctctatatcacctacgccgagtcgcgccgtatc
tatggccgggaaaattatgcccgtccttcacgtttcatcaaggagatccctggcgactat
gtgcaggagatccgcatgcgaaccagcgtgtcggcgccggccagcagcaacagattcagt
caggccgagtccgcctttaacgattcaggcttcaatatcggccagcgggtgaatcatccc
aagtttggcgaaggcaaggtgactaacttcgagggcagcggcgcccaggccagagtccag
gtggattttctcgacgtgggcagcaagtggctggtggtggcctatgcccgtctcgagacc
ctgtaa
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integrated database retrieval system
