Shewanella aegiceratis: K0H80_17855
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Entry
K0H80_17855 CDS
T09153
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
saeg
Shewanella aegiceratis
Brite
KEGG Orthology (KO) [BR:
saeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saeg03400
]
K0H80_17855
DNA repair and recombination proteins [BR:
saeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
K0H80_17855
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QYJ82124
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All DBs
Position
complement(4114905..4115417)
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AA seq
170 aa
AA seq
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MNDSRSYNMSRIRGKDTNPEMWLRKRLHGLGFRYRLHDKSLPGTPDLVFPKYRAVIFVNG
CFWHMHQCRNFHFPNSSFSKGRGPKWWRDKLIGNRQRDLENIEKVRELGWRVLVLWECAL
PGKGKRKCKNNGEQTMEVITAVSTWLNGKQHYLEIPSPESILVHASERSL
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaatgactcccgcagctataatatgtcccgtattcggggtaaggatacaaaccctgag
atgtggttgagaaaacggctccatggtcttgggtttcgttatcggctgcatgataaaagc
ttaccggggacgcctgatttggtttttcctaagtaccgtgctgtaatttttgtcaacggc
tgtttctggcacatgcatcagtgtcgtaactttcattttcccaattcttctttttccaaa
ggccgcgggccaaagtggtggcgtgacaaactaattggtaatcgtcagcgagatctagaa
aatatagagaaagttcgtgagctgggatggcgagtattggttttgtgggagtgtgcactt
cccgggaagggaaaaagaaagtgcaagaataacggtgagcaaacaatggaagtgattaca
gctgtatccacttggctcaatggtaagcaacattatttagaaatcccttcacctgagagc
attttggtccatgcatctgagcggtctctataa
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