Sphingomonas aerolata: NEF64_00495
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Entry
NEF64_00495 CDS
T08450
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
saer
Sphingomonas aerolata
Pathway
saer02020
Two-component system
saer02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NEF64_00495
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NEF64_00495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saer03021
]
NEF64_00495
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
saer02035
]
NEF64_00495
Transcription machinery [BR:
saer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NEF64_00495
Bacterial motility proteins [BR:
saer02035
]
Flagellar system
Flagellar assembly proteins
Stator
NEF64_00495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_ECF
Sigma70_r3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
USR00386
LinkDB
All DBs
Position
113728..114507
Genome browser
AA seq
259 aa
AA seq
DB search
MSAEPMTAAFDKARPARAGEIPTGPLTYRPQQRPGGDPDQLAKQHLAMVRRIAWHVHGSM
SSIVEVEDLVQVGLVALVEAAAGFEERGTPFKAYVATRLRGAMIDELRRQATTTRGAMRR
RRQYADAISTLTAQTGKAPGDAMIAQHIGVSIDKLRSDYVTADAIRFDSIDEVYADDMPW
FADDTPDAFEQLADSDLRGALIAAITALPEREAQVIQLYYVEEMNLEEIGAVFDIGAARV
CQIKASAHAKLKKALARKV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaaccgatgacggccgcgttcgacaaggcccgccccgcgcgcgccggcgaa
attccgacggggccgctcacctatcgtccccagcaacgccctggcggcgaccccgatcag
ctcgccaaacagcatctcgccatggtccgccggatcgcgtggcacgtgcatggcagcatg
agcagcatcgtcgaggtcgaggatctggtgcaggtcggcctcgtcgcgctggtcgaggcc
gcggccgggttcgaggagcgcggcacgccgttcaaggcctatgtcgcgacccgcctgcgt
ggcgcgatgatcgacgaactgcggcgccaggcgacgacgacgcgcggcgcgatgcgccgc
cgccggcaatatgccgacgccatttccacgctcaccgcccagacgggcaaggcccccgga
gacgccatgatcgcccagcatatcggcgtcagcatcgacaagctgcgtagcgactatgtg
accgcggacgcgatccggttcgattcgatcgacgaggtctatgccgacgacatgccgtgg
ttcgccgacgacacccccgacgcgttcgaacagctcgccgacagcgacctgcgcggcgcg
ctgatcgccgcgatcaccgcgctgcccgaacgcgaggcgcaggtgatccagctctattat
gtcgaggagatgaacctcgaggagatcggcgcggtcttcgacatcggcgccgcccgcgtc
tgccagatcaaggcgtccgcgcatgcgaaactgaagaaggcgctcgcccgcaaggtctga
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