Sphingomonas aerolata: NEF64_00605
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Entry
NEF64_00605 CDS
T08450
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
saer
Sphingomonas aerolata
Pathway
saer00300
Lysine biosynthesis
saer00470
D-Amino acid metabolism
saer01100
Metabolic pathways
saer01110
Biosynthesis of secondary metabolites
saer01120
Microbial metabolism in diverse environments
saer01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NEF64_00605 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEF64_00605 (lysA)
Enzymes [BR:
saer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NEF64_00605 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
USR00408
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Position
complement(133718..134980)
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AA seq
420 aa
AA seq
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MDHFHYRDGVLHVEDVALPAIAEAVGTPVYVYSTATFRRHAQVFRDALKGAGRVHLAYAI
KANPNVAVLRVLADEGYGADVVSAGEMARALAAGIPASDIVFSGVGKTRDELARALDAGI
GQFNLELEEEGEVLAALARDRGIRAPAVLRVNPDVDAGTHAKISTGRKENKFGVPIDQAP
AMFDRLARHDGLDLRGVAIHIGSQLADLAPLEAAYARIGELVAELRAAGHVISRVDLGGG
LGVPYKPDDVLPSPADYGAMVARATAGWDVELMFEPGRVIAGNAGVLLTKVIWVKPGVTN
PYVIVDAAMNDLARVAMYDAYHDFVAVEPGGERMTANIAGPVCETGDTFAMGRDIDVVKS
GDLGVFRTAGAYGATMASTYNSRALVPEVLVDGDRFAVVADRIEPETILAAERVPEWLKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttccactatcgcgacggcgtccttcatgtcgaggacgtcgcgcttcccgcg
atcgccgaggcggtcgggacgcccgtctatgtctattcgaccgcgacgttccgccgtcat
gcgcaggtgttccgcgatgcgctgaaaggcgcggggcgcgtgcatctggcctatgcgatc
aaggccaatccgaacgtcgccgtgctgcgcgtcctggcagacgagggttacggcgcggac
gtggtgtcggcgggcgagatggcgcgcgcgctggcggcgggcattcccgcgtccgacatc
gtgttttcgggcgtcggcaagacccgcgacgagctcgcccgcgcgctcgatgccgggatc
ggccagttcaacctcgagctcgaggaggagggcgaggtgcttgccgcactcgcccgcgat
cgcggtattcgtgcaccggcggtgctgcgcgtgaaccccgatgtcgatgcgggcacgcac
gccaagatttcgaccgggcgcaaggagaacaagttcggcgtgccgatcgaccaggcaccg
gcgatgttcgatcggctggcccggcatgacgggctcgacctgcgcggggtggcgatccat
atcggcagccagctcgccgatctcgccccgctcgaggcggcctatgcgcggatcggcgaa
ctcgtcgccgaactgcgcgcggcggggcacgtcatcagccgggtcgatctgggcggcggt
ctcggcgtaccgtacaagcccgacgacgtgctgccgagcccggccgactatggcgcgatg
gtcgcacgtgcgaccgccggctgggacgtcgagctgatgttcgagccggggcgcgtgatc
gcagggaatgccggcgtgctgctgaccaaggtcatctgggtgaagccgggggtcaccaac
ccctatgtgatcgtcgatgcggcgatgaacgacctcgcgcgcgtcgcgatgtacgatgcc
tatcacgacttcgtcgcggtcgagccgggcggcgagcggatgaccgcgaacatcgccggg
ccggtgtgcgagaccggcgacacctttgcgatggggcgtgacatcgacgtcgtgaagtcg
ggcgatctgggcgtgttccgcaccgcgggcgcgtacggcgcgacgatggcgtcgacctat
aacagccgcgcattggtgcccgaggtgctggtcgatggcgaccggttcgcggtggtcgcc
gaccggatcgagcccgagacgatcctggccgccgagcgcgttcccgaatggctcaagcgg
tga
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