Sphingomonas aerolata: NEF64_01020
Help
Entry
NEF64_01020 CDS
T08450
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saer03000
]
NEF64_01020
Transcription factors [BR:
saer03000
]
Prokaryotic type
Helix-turn-helix
LacI family
NEF64_01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
AIRS
HTH_Crp_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
USR00483
LinkDB
All DBs
Position
complement(224869..225876)
Genome browser
AA seq
335 aa
AA seq
DB search
MPTIIEVAAMAGVSTATVSRVLSRPDQVSEKTRLRVLAIVRSSGYAPNVAARSLRTLRAA
KILLTVPDISNPFFASVIRGAEEAARDAGYSVVVGDTRHDSAVEDQYADMLSRREVDGLI
FLGHRLPDSLASLLAREGGAAPIVNGCEYSADLGVPSVHIDNAAASAEAIAHLADLGHRA
IGVVTGPEISPISRDRLTGALRAAELHGLRDALHVEIGDYSAGSAFVATRALLAAGVTAI
FCFSDEMALGALSAIGEAGLSCPRDVSVMGFDDLPLARYFQPALTTIAQPKGMIGQRTVE
LLVDILRGVECPRRQTTLAHTLVVRGSTAAPRTDR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgatcatcgaagtggccgcgatggctggcgtctccaccgcaacggtgtcgcgc
gtgctcagccgaccggaccaggtgtccgaaaagacccggctgcgtgtgctcgcgattgtc
cggtcgtcgggctacgcccccaatgtcgccgcgcgcagcctgcgcacgctgcgcgccgcc
aagatattgctgacggtccccgacatctcgaacccgttcttcgccagcgtcatccgcggc
gcggaggaggcggcgcgcgacgcgggctattcggtcgtcgtcggcgacacgcggcatgat
tccgcggtcgaggatcaatatgccgacatgctgtcgcgtcgcgaagtcgacgggctgatc
ttcctcggccaccgcctgcccgacagcctggcgtcgctgctcgcgcgggaggggggcgcc
gcaccgatcgtcaatggctgtgaatatagcgcggatctcggcgtccccagcgtccatatc
gacaatgcggcagcgagcgcggaggcgatcgcgcatctcgccgatctcggccaccgggcg
atcggcgtcgtcaccggccccgagatcagtccgatcagccgcgaccgtctgacgggtgcg
ctgcgggcggccgagctgcacggtctgcgcgacgcgctgcacgtcgagatcggcgattat
tccgcggggtcggcgttcgtggccacgcgtgcgctgctcgctgccggggtgacggcgatc
ttctgcttcagcgacgagatggcgctgggggcgctgagcgcgatcggcgaggcgggactg
tcctgtccgcgcgacgtgtcggtcatggggttcgacgatcttccgctcgcacgctatttc
cagcccgcgctgaccaccatcgcgcaacccaaggggatgatcggccagcgcaccgtcgag
ctgctcgtcgacatactgcgcggcgtcgaatgcccgcggcggcagacgacgctcgcgcat
acgctcgtggtgcgtggcagcacagccgcgccgcgcaccgaccgctaa
DBGET
integrated database retrieval system
