Sphingomonas aerolata: NEF64_03480
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Entry
NEF64_03480 CDS
T08450
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saer02000
]
NEF64_03480
Transporters [BR:
saer02000
]
Other transporters
Pores ion channels [TC:
1
]
NEF64_03480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
USR02010
LinkDB
All DBs
Position
complement(719507..722290)
Genome browser
AA seq
927 aa
AA seq
DB search
MATDPQTPTAPAATEAPTEDIIVTGSRIRRDPLDQPSPVITVDENAIARTGLSSVADILQ
RLPASSGGLNSKFNSSGNFGNPPDGGGVGAGSAVLDLRYLGPKRTLVLVDGLRFVNGASA
SGIPATVDLNSIPSSMIERIEVLQSGASTQYGSDAIAGVVNIITKQNQKGFKGSAQYGQY
LGDNDGKTQDYQLSYGFGSQGVHVVAGGYYTKQESVSAADRDISQFPNPGQTSCAEPIGG
CSSFTPFGRFLVNGQNITLRGPVASGRPVYDPTLATGDFKAFTAADRFNFAPLNYFLTPV
ERFGGFVNTRAEFSEALNLRVKAVYNRRNSQNQAAFLPLGIGPDVGNGNMLDTLSVDATN
PFNPFGVTLVPGQNYTGIFRRLVEAGQRTYSQQVDTMSLTGTLDGKFQMFGHNWYWDASA
VIGYNDAKQLFTGNINAARLARAIGPISQCTGECVPFNFFGGVGSITPAMLGYIGFDERD
RSRQKLNDYTANVSGELFDLPGGPVGIAIGYEHRYQFGSFTPDPIIQAGLGADIPAQAAS
GKFNVDEVYGEIRLPLLRDIPGIASLELNGAVRHSNYSTFGGNTTLSGGALWKPVSDLLL
RGQYAESLRAPSIGELFGAQSRFDASIDDPCTSAAGGLFQSNPTVRANCVANGVPGNGSY
AEPSGQLPVLTGGNSELRPETARTLLFGGVYSPSWARGGTLSALSLEVNYYDIKVDDSIA
SIPAQVLLSRCAQTGDALSCAAVRRAPSGIVTAINGLLLNTGGIRTKGIDATLTVRSGET
GAGRFGLYVSGNYLLKYSERTPATDGFVTTDYVGTERGSPDQTYPHFKGLGTIDWSVGPV
TASVTGRYIDNVDEIAAENALKSRLYGDVQLQFRPAWLDSKLALTFGVNNVFDKDPPACF
SCSLNNFDPTTYDIPGRFGYLRLSYGL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ctggcgaccgacccccagacgcccaccgcccccgcggcgaccgaggcccccaccgaagac
atcatcgtcaccggatcgcgcatccgccgcgacccgctcgatcagccatcgcccgtcatc
accgtggatgagaacgcgatcgcgcgcaccggtctgtcgtccgtcgcggacatcctgcaa
cgcctgcccgcctcgtcgggcggcctcaattcgaagttcaacagctcgggcaatttcggc
aacccgcccgatggcggcggcgtcggcgccggctccgcggtgctcgacctgcgctatctc
ggccccaagcggacgctcgtgctcgtcgacggcctgcgcttcgtcaacggcgcgtcggcc
agcggcatcccggcgacggtcgatctcaactcgatcccgtcctcgatgatcgaacggatc
gaggtgctgcaatcgggcgcctcgacgcaatacgggtccgacgcgatcgccggcgtcgtc
aacatcatcaccaaacagaaccagaaggggttcaagggatcggcgcaatatggccagtat
ctcggcgacaatgacggcaagacgcaggattaccagctgagctacggctttggcagccag
ggcgtgcacgtcgtcgcgggcggctattacaccaagcaggaatcggtcagcgccgccgat
cgcgacatctcgcaattccccaatccggggcagacgagctgcgccgaacccatcggcggc
tgctccagcttcacgcccttcggccggttcctggtgaacggccagaacatcacgctgcgc
ggccccgtcgccagcggtcggccggtctatgacccgacgctcgcgaccggcgacttcaag
gcgttcaccgccgccgatcggttcaacttcgccccgctcaactatttcctgacccccgtc
gagcggttcggcggcttcgtcaacacgcgcgccgagttttccgaggcgctcaacctgcgc
gtgaaggcggtctataaccgccgtaattcgcagaatcaggcggcgttcctcccgctcggc
atcggtcccgacgtcggcaacggcaacatgctcgacacgctctcggtcgatgcgaccaac
ccgttcaacccgttcggcgtgacgctcgtccccgggcagaactacaccgggatcttccgt
cgcctcgtcgaggcggggcagcgcacctacagccagcaggtcgacaccatgtcgctgacc
ggcacgctggacggcaagttccagatgttcgggcacaactggtattgggatgcgagcgcg
gtcatcggctataacgatgccaagcagctgttcaccggcaacatcaacgccgcacgcctc
gcccgcgcgatcggcccgatcagccagtgcaccggcgaatgcgtgccgttcaacttcttc
ggcggggtcggttcgatcaccccggcgatgctcggctatatcggcttcgacgaacgcgac
cgcagccgccagaagctgaacgactataccgccaacgtctccggcgagctgttcgacctg
cccggcgggccggtcggcatcgcgatcggctatgagcatcgctatcagttcggcagcttc
acgcccgacccgatcatccaggcgggtctcggcgcggacatcccggcacaggcggcgagc
ggcaagttcaacgtcgacgaggtctatggcgaaattcgcctgccgctgctgcgcgacatt
cccggcatcgcctcgctcgagctgaacggcgcggtccgccactcgaactattcgaccttc
gggggcaatacgacgctcagcggcggcgcgctgtggaagcccgtcagcgacctgctgctg
cgcggccaatatgccgaatcgctgcgcgcaccgtcgatcggcgaactattcggcgcgcag
tcgcggttcgacgcctcgatcgacgatccctgcaccagcgccgcgggcgggctgttccag
tccaacccgaccgttcgcgcgaactgcgtcgccaacggcgtgcccggcaatggcagctat
gccgaaccctcgggccagttgccggtgctcaccggcggcaacagcgagctgcgccctgaa
accgcccggacgctgctgttcggcggcgtctacagccccagctgggcccgcggcggcacg
ctctcggcgctcagcctcgaggtcaactactacgacatcaaggtcgacgactcgatcgcg
tcgatcccggcccaggtgctgctcagccgctgcgcccagaccggcgacgcgctcagctgc
gcggcggtccggcgtgcccccagcggcatcgtgaccgcgatcaacggcctgctgctcaac
accggcggcatccgcaccaagggcatcgacgcgacgctgacggtccgctcgggcgagacc
ggcgccgggcgcttcggcctctacgtctcgggcaactatctgctcaagtacagcgagcgg
acgcccgcgaccgacggcttcgtcacgaccgactatgtcggcaccgaacgcggctcgccc
gatcagacctatccgcacttcaagggactgggcacgatcgactggtcggtgggaccggtc
accgcgagcgtcaccggacgctatatcgacaatgtcgacgagatcgctgcggagaacgcc
ctgaagagccgcctctacggcgacgtccagctccagttccggccggcctggctcgattcg
aagctcgcgctgaccttcggcgtgaacaacgtcttcgacaaggatccccccgcctgcttc
agctgcagcttgaacaacttcgacccgacgacctatgacatcccgggccggttcggctat
ctgcggctctcctacgggctgtag
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