Sphingomonas aerolata: NEF64_06000
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Entry
NEF64_06000 CDS
T08450
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saer03400
]
NEF64_06000 (radA)
DNA repair and recombination proteins [BR:
saer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NEF64_06000 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_16
RecA
Lon_C
AAA_30
AAA_22
AAA
Glyco_hydro2_C5
AAA_5
DUF7125
nSTAND3
NACHT
AAA_14
TniB
Rad51
CobU
AAA_29
NTPase_1
SLFN-g3_helicase
AAA_24
DAP3
PAXNEB
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
USR01384
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All DBs
Position
1286365..1287735
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AA seq
456 aa
AA seq
DB search
MAKIQKRYVCQACGSVASRWAGQCADCHEWNTLVEEANTAATPFHSKHNLQTGGRAIQLV
GLDAEIKLPDRMATGIAELDRALGGGFVEGSATLIGGDPGIGKSTLLLQAAAKMALAGQS
VAYVSGEEAADQVRLRARRLGLGNAPVQLAAATSTRDILTTLQTKPPAMLVIDSIQTMHS
DLIEGAPGTVSQVRASAQELIRFAKERGTAVVLVGHVTKDGSIAGPRVLEHMVDTVLSFE
GERSHQYRILRAIKNRFGGTDEIGVFSMQTEGLAEVGNPSSLFLTTRDDAMTGATVFPAL
EGTRPVLVEIQALTVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSSAEVYLNIA
GGYRVQDPAADLAVAAALISAMAERPVPVDAVAFGEVALSGEIRPVAHGPLRLKEASKLG
FERALVPASMSDEKSGMRLSGFKTLAAFVDHMLGRG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaattcagaaacggtatgtgtgtcaggcgtgcggatcggtcgcatcgcgctgg
gccgggcaatgcgccgactgccacgaatggaacacgctggtcgaggaggcgaataccgcc
gcgacgccgtttcattcgaagcacaatctgcagaccggcggccgcgcgatccagctcgtc
gggctggatgcggagatcaagctgcccgaccggatggcgaccggtatcgccgagctcgac
cgtgcgctgggcgggggcttcgtcgaggggtcggccacgctgatcggcggcgatcccggg
atcggcaagtcgaccttgctgttgcaggcggcagcgaagatggcgcttgccggccagtcg
gtggcctatgtctcgggcgaggaggcggcggaccaggtccggctgcgcgcgcggcgtctc
gggctcggcaatgcgcccgtgcagctcgcggcggcgacctcgacgcgcgacatcctgacg
acgctgcagacaaaaccgccggcgatgctggtgatcgattcgatccagacgatgcattcc
gacctgatcgaaggcgcacccggtacggtcagccaggtacgggcatcggcgcaggagctg
atccggttcgccaaggagcgcgggaccgcggtggtgctggtcggccatgtgaccaaggac
ggcagcatcgcgggcccgcgcgtgctcgagcatatggtcgacacggtgctgagcttcgaa
ggcgagcgcagccaccagtaccggatcctgcgcgcgatcaagaaccgcttcggcggcacc
gacgagatcggcgtcttctcgatgcagaccgaggggctggcggaggtcggcaacccgtcg
tcgctgttcctgacgacgcgcgacgacgcgatgaccggcgccacggtgttcccggcgctg
gaggggacgcgacccgtgctggtcgagatccaggcgttgacggtgcggctggcgagcggc
gctacgccgaggcgcgcggtggtcggatgggattcggggcggctggcgatgatcctcgcg
gtgctcgaggcgcggtgcgggctgagcttttcgtcggccgaggtctatctcaacattgcc
ggcgggtaccgggtgcaggatcccgccgccgatctcgcggtagccgcggcgctgatatcg
gcgatggcggaacgtcccgtaccggtcgatgcggtggcgttcggcgaggtcgccttgtcg
ggcgagatccggccggtcgcgcacggtccgctgcgtctgaaggaagcgagcaagctgggg
ttcgagcgcgcgctcgtccccgcgtcgatgagcgacgagaagagcggcatgcggctgtcg
gggttcaagacgctcgccgcgttcgtcgaccacatgctcgggcggggatga
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