Sphingomonas aerolata: NEF64_07400
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Entry
NEF64_07400 CDS
T08450
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
saer
Sphingomonas aerolata
Pathway
saer00300
Lysine biosynthesis
saer01100
Metabolic pathways
saer01120
Microbial metabolism in diverse environments
saer01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NEF64_07400 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
saer01002
]
NEF64_07400 (dapE)
Enzymes [BR:
saer01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NEF64_07400 (dapE)
Peptidases and inhibitors [BR:
saer01002
]
Metallo peptidases
Family M20
NEF64_07400 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
UBA_5
Motif
Other DBs
NCBI-ProteinID:
USR01634
LinkDB
All DBs
Position
complement(1562078..1563199)
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AA seq
373 aa
AA seq
DB search
MIDPLALAQALLAEDSVTPARGRVFDVLEAALTPIGFDVDRFTIGEAPDGPVENMLAVRT
GSGPHLAFAGHLDVVPPGEGWQGSPWSAEVRDGLLYGRGAVDMKGAIAAFAAAASRTDAG
TVSLIITGDEEGPATFGTRALIDRMAARGIHPDQCIVGEPTSTAALGDTIKIGRRGSVNI
WISVPGRQGHVAYPHLADNPIPRLVEILAEIETVALDQGNAWFQPSNIEVTDIAVGNPAH
NVIPAAASARLSIRFNDTHSGDALIARIAALAARHDPAAVVTGRVSGEAFLTEPGPLSTL
VSDAITAVTGVVPDLSTTGGTSDARFLAKLCPVVEFGLINATMHKLDEAVAVEDLYRLTD
IYADVIVRAVERG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatccgctggcgctggcgcaggcgctgctggccgaggacagcgtaaccccggcg
cggggccgcgtgttcgacgtgctggaggcggcgctgactccgatcggctttgacgtcgac
cgcttcacgatcggcgaagcgcccgacggtccggtggaaaacatgctcgcggtccggacc
ggatcggggccgcatctggcatttgcagggcatctcgacgtcgtacccccgggcgagggg
tggcagggctcgccctggtcggccgaggtccgcgacggcctgctctacgggcgcggcgcg
gtcgacatgaagggcgcgatcgccgcctttgccgctgccgccagccggaccgacgcgggc
accgtgtcgctgatcatcaccggggacgaggaaggtcctgcgaccttcgggacgcgcgcg
ctgatcgatcggatggcggcacggggcatccatcccgaccagtgcatcgtcggcgagccg
acctccaccgccgcgctcggcgacacgatcaagatcggccggcgcggctcggtcaatatc
tggatcagcgtccccgggcggcagggtcacgtcgcctatccgcatctcgccgacaacccc
atcccacggctggtcgagatccttgccgagatcgaaaccgtcgcgctcgaccagggcaat
gcctggttccagccgtcgaacatcgaggtcaccgatatcgcggtcggcaatcccgcgcat
aacgtcatcccggccgcagcgtcggcgcggctcagcatccggttcaacgacacgcatagc
ggtgacgcgctgatcgcccggatcgccgcgctagcggctcggcatgatcccgcagcggtc
gtcaccggtcgcgtgtcgggtgaagcctttctgacggaacccgggccgctgtcgacgctg
gtgtcggacgcgatcaccgcggtgacgggggtcgttcccgacctgtcgacgacgggcggc
acgtccgacgcgcggtttctggcgaagctgtgcccggtggtcgaattcgggctgatcaat
gcgacgatgcacaagctcgacgaggcggttgcggtcgaggacctgtaccgcctgaccgac
atctatgccgatgtcatcgtccgcgcggtcgagcggggatag
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