Sphingomonas aerolata: NEF64_09820
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Entry
NEF64_09820 CDS
T08450
Name
(GenBank) Ig-like domain-containing protein
Organism
saer
Sphingomonas aerolata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_6
Big_13
BapA_N
Big_9
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
USQ98781
LinkDB
All DBs
Position
complement(2149823..2157322)
Genome browser
AA seq
2499 aa
AA seq
DB search
MDVHVISKATGAVTRVSGDAVSLDAPSVVRLDLARSEVAGFEREGNALIVRLTNGDHVEV
ANFHPEDAGVAPHDLVLNEPGGTMWQARVAPGAPRFVPLEDPEDLVAAAGGGGGASLALP
AALLGGVVTAGGAAAALGGGGGSDTPATQPDPATPPVTTPPVTTPPVITPPDTTPPAAPS
VTIASDGTAVTGLGEAGATVIVRDPAGIVIGSVVVAADGGFTAPLSPAQANGGNLAVTQT
DAAGNVSPAVQIAAPDTTAPGAPGVAIDAGGATITGRGEAGATVTVRDAAGNVIASVVVA
ADGSFAAPLSPEQANGGSLTVTQTDAAGNISPAVQVAAPDTTAPGAPEAAIDAGGATVTG
RGEAGATVTVRDAAGIVIGSVVVAADGSFAAPLSPPQANGGSLAVTQTDAAGNVSPAVQV
AALDTTAPGAPEATIDAGGATVTGRGEAGATVMVRDAAGIVIASVVVAADGSFTTPLSPA
QASGGSLAVTQTDAAGNVSAAVQIASPDLTAPVTPAAAVNGDGTLLSGTGEPGATVTVTD
ANDVVIGTATAGTDGAFAVPLSPAQTNGETLGVSQADAAGNASPVVGVIAPDLTAPAAPT
IALDGTGTIATGAGEPGATVTITGEGGVVLGSGSVDAGGRYEITLRSAQTDGERVEAVQS
DAVGNVSGNASTIAPDFTAPAQPVAAINGDGTLVTGTGEPGAQILVRDLAGTTIGTAQVG
VDGQYSVLLDPAQANGQRLAVIQTDAAGNAASPLSLIAPDVTAPAAPAATIDATGTIVSG
SGEPGARISVRDATDTEIGAAIVDARGNYDVVLVPPQIDSQLISVVQTDAAGNVSTATAL
IAPDQTAPAAPTATVTADGASLTGTGEAGATLTVRSPVGAVIGTIIVAGDGTYTVPLTPP
QIDGETLSVRQVDGAGNVSPEATAAAPDLVADLGPDAPTATIAIDGSAVTGSAVAGATVT
LFDADGVVIATGLAAGDGQYAIALVPALRDGETIRVTQTDGDGNVSPPATAIAPDLTAPD
APSAVLDQTGTALTGTGDADAAITVRDADGTVIGTATANAAGAFAVILDPAQRDGGTLAV
TQADAAGNVSAPALVAVPDVTAPAAPTATVEGDGSLLVGTGEAGTIVTVRDPSGTAIGTA
TVAADGGFRIMLDPAQADGETLSVTLTDAAGNVSAPATAIAPDITAPGVPTATISGDGSV
VTGSGQVGATVTVTAPGGATLGTAIVAADGAYAVALTPPQLDGEALSVVQADRAGNVSAP
VGLLAPDTTAPDAPTATISGDGSIATGTGAPGATVSVTNAAGIVIGTAIVAEDRSYTAAL
SPAQANGERLGVTQADAAGNVSASTGVTAPDITAPPAPVAMLDASGSVVMGTGEPGATLT
VRDAAATVLGTAIVTAQGDYSVTLATPQIDRQALSVSQADAAGNPSPATTLTAADLTAPA
APLATVAPDGLTLTGTGEAGATITVRDPLGRVVGQAVVAGDGTYIVPLDPAQTNGEVLGV
DQRDAAGNGSPIVTAIAPDLVADTTPDAPSAAVDADGAAVAGTANASAAIIVYDAVGTII
GTGVAGPDGSYRVALVPARIDGETVRVTQTDADGDVSPPATAVAPDLTAPAAPTAILDLT
GSVVTGTGEPGATITIRAADTTSLGTAIVGANGAYAVTLTPAQIDGQTLAATQADAAGNI
STPFVLIAPDYTAPALPVVTIAPDGSTATGIGEPGATVTIRLGAVILGTAQVAADGSYTA
QLSPAPVNGETLSASQADPTGNVSAVATVAAPDITAPPPPIISAITNDGTTLTGTGEAGA
RVEVRGPDATLIGVATVDAEGRYTVTLAPAQAAGGTLSVTQADATGNVSTPASIAAPFDI
AAFGNVDAAGLDLLPTTAPVDLGNARYLALVSLGLVNLDAEVLAVRNVRFSVAEGHSLDA
RFTYDAAATIGAASDYAVVVQRLVGTQWVAVTGSGPASLLEIGLLNGNLSATETLGPGVY
RAFLTFQGTAGVGLLGDLSVAGIDSDFTDIAGATPIAASGNVITDAGPGGEIDVTGPGTR
VASVTVNGVTTDVGPDGSSVTGTWGSLRINPDGSYSYTPVANAGAIGRTETFTYTLVDPT
DGERETATLTIAIGSPDITGAPLAVADQAFADVTFQNVVTTLPPAPAFDFPSTGTILTGQ
VTGTGTGSFTVAPAAVSDITIVAARTGGLLSVLPAYTVSVRSADGLIVRTATINTVLNPV
LGGVATFTFDDLPSGSYSYQVSSNAALSVGNFGTTVSLGSSTLFLNDYTLATRETATGNL
LDNDTTNTSFAAIRVDRGTGFAEIGDTPVTLTGRYGTLQIDETGGYAYQPSATLGFSAVD
LTDSFTYQLVQPNGVLSTATLTVTIDVPGDGPAAAAGFASVASDASGFAEVTALVEAGDL
DVIPLDALTVQSIESGAFAAAGPVIGLATYDLFEGQGELEDVLSQYLAAEPQASIGEEPD
TVSFDPIVVTEIATVVDPFDYLATIPDQDQNGLVTSHVV
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atggacgtacacgtcatctcgaaggcaaccggggccgtcacgcgcgtatcgggagacgcc
gtcagcctcgatgcgccgagcgtcgtccggctcgaccttgcccgctccgaagttgcgggg
ttcgagcgcgagggcaatgcgctcatcgtccgcctgaccaacggggaccatgtcgaggtc
gccaattttcatcctgaggatgccggggtcgcaccgcatgatctcgtcctgaacgaaccc
ggcggcaccatgtggcaggcgcgcgtcgcgccgggcgcgccgcgcttcgttccgctcgag
gatcccgaggacctcgtagcggcggcgggcggcggcggtggcgcctcgctcgcgctgccc
gctgccctgctgggcggggtggtcacggcaggcggcgcggcggcggcactgggcggcggc
ggcggctcggatactcccgcgacccagcccgatccggccaccccacccgtcacgacccca
cccgtgacgaccccgcccgtcatcaccccgcccgacacgacaccccccgccgctccgagt
gtcacgatcgcaagtgacggcacggccgtcaccgggctcggcgaggccggcgcgaccgtc
atcgtgcgcgatcccgcgggcattgtgatcggcagcgtcgtcgtcgcggcggacggcggc
ttcacggcaccgctgtcgccagcgcaggccaatggtggaaatcttgccgtcacgcagacc
gatgctgccggtaatgtatcccccgccgtacagatcgctgctcccgataccaccgcaccc
ggcgcacccggagtggcgattgatgctggtggcgcgacgatcacgggtcggggcgaagcg
ggcgcgaccgtcacggtgcgtgatgctgcgggcaatgtgatcgccagcgtcgtcgtggca
gcggacggcagcttcgctgcgccactgtcaccggagcaagctaatggcggcagccttacc
gtcacgcagaccgacgcagcgggcaatatctcccccgccgtgcaagtcgctgcgcccgat
accactgcacccggcgcgcccgaggcagcgatcgacgctggtggcgcgaccgtcaccggg
cgcggcgaagcgggcgcgaccgtcacggtccgcgacgctgcgggcattgtgataggcagc
gtcgtggtggcagcggacggcagcttcgctgcgccactgtcacccccgcaagctaatggc
ggcagccttgccgtcacgcagaccgacgcggcgggcaatgtctcccccgccgtgcaggtc
gctgcgcttgataccaccgcacccggtgcgccggaggcaacgatagacgctggtggtgcg
accgtcaccgggcgcggtgaagcgggtgcgaccgtcatggtgcgtgatgctgcgggcatt
gtgatcgccagcgtcgtcgtggcggcagacggcagcttcacgacgccgctgtcgcccgcg
caggcgagtggcggcagcctcgccgttacgcagaccgacgctgcgggtaatgtctccgct
gcggtgcagatcgcgtcgcccgacctcaccgcgccggtgacccccgccgctgcggtgaac
ggcgacgggacgctgctcagcggcaccggcgagccgggcgcgaccgtgacggtgaccgac
gccaatgatgtcgttatcggcaccgcgaccgccgggacggacggcgcctttgcggtgccg
ctgtcgccggcgcagaccaatggcgagacgctgggcgtcagccaagcggatgcggcgggc
aatgcctcgcccgtggtcggggtaattgcgcccgatctcaccgcgccggcagcaccgaca
atcgcgctcgacggcaccggcacgatcgcgaccggcgctggcgagcccggtgcgaccgtc
accatcaccggcgagggcggcgttgtgctcggaagcggaagcgtcgacgccggcggacgc
tatgaaatcacgctgcgatcggcgcagaccgatggtgagcgggtcgaggcggtccagagc
gacgccgtgggcaatgtgtcgggcaatgcgagcacgatcgcgcccgacttcaccgcgccg
gcgcagccggtcgccgcgatcaacggggacggtacgctggtgacggggacgggcgaaccc
ggcgcgcagatcctggtccgcgaccttgccggcaccacgatcggcaccgcgcaggtcggg
gtcgacgggcaatatagcgtgctgctcgacccggcacaggcgaatggccaacggctcgcg
gtgatccagacggacgccgcaggcaatgccgcgtccccactgtcgctgatcgcccccgac
gtgaccgcgccggcggccccagccgccacaatcgatgcgacagggacaatcgtgagcggc
agcggcgagcccggtgcccggatctcggtccgcgacgccaccgataccgagatcggcgcg
gcgatcgtcgatgcgcgcggcaattacgatgtcgtgctcgtcccgccgcagatcgacagc
cagcttatctcggttgtgcagacggatgccgcgggcaatgtctcgaccgccaccgcgctg
atcgcacccgaccagaccgccccggccgcgccgactgcgacggtcaccgccgatggtgcg
agcctgaccgggaccggagaagcgggtgcgacgctgacggtgcgcagcccggtcggggcg
gtgatcggcacgatcatcgtcgcgggcgatggcacttataccgtcccgctgactccgccg
cagatcgacggggagacgctgagcgtgcggcaggtcgatggcgcgggcaatgtctcgccc
gaggcgactgccgcggcgcccgatctggtcgccgatctcggccccgatgcaccgaccgcg
acgatcgccatcgacggcagcgccgtgacggggagcgcggtagcgggcgcgacggtcacg
ctgttcgatgccgatggcgtggtgatcgcgacgggactcgccgcgggcgacgggcagtac
gccatcgcgctcgtccctgcgctgcgtgacggcgagacgatccgcgtgacgcagaccgac
ggggacggcaatgtctcgccccccgcgaccgcgatcgcccccgacctgaccgcgcccgac
gcccccagcgcggtgctcgaccagacgggcacggcgctgaccgggacgggcgacgccgac
gcggcgatcacggtgcgcgatgccgacggcaccgtgatcggcaccgcgacagcgaatgcc
gccggggcgtttgcggtgatccttgatcctgcgcagcgcgatggcgggacgcttgcggtg
acgcaggcggacgccgcgggcaatgtctcggcccccgcgctggtcgcagtgcctgatgtc
accgcccctgcagcgccgacggcgaccgtcgagggcgatggcagcctcctcgtcggcacg
ggtgaggccggtacgatcgtcaccgtgcgcgatccatccggcaccgcgatcggtaccgcg
acagtcgccgccgatggcggtttccgtatcatgctcgaccccgcccaggcggatggcgag
acgctgagcgtgacgctgaccgatgcggcgggcaatgtgtccgcacccgccaccgcaatc
gcccccgacatcaccgcgccgggcgtgccgaccgcgacgatcagcggggacggttcggtc
gtcaccggatcaggccaggtcggcgccaccgtgaccgtcaccgcgcccggcggagcgacg
ctcgggaccgctatcgtcgccgcggacggtgcctatgccgtcgccctcacccccccgcag
ctcgacggcgaggcgctgtcggtcgttcaagccgaccgcgcgggcaatgtctcggccccg
gtgggtctgctcgcccccgataccaccgcacccgacgcgcccaccgcgacgatcagcggc
gacggcagtatcgcgaccggtaccggcgcgcctggtgcgacggtcagcgtcaccaacgca
gcgggcatcgtgatcggtaccgcgatcgtcgcagaggatcggagctataccgcggcgctg
agcccggcgcaggccaatggcgagaggctcggcgtgacgcaggccgacgcggcgggcaat
gtctccgcgtcgaccggcgtgacggccccggacatcaccgcgccgcctgcgcccgtcgcg
atgctcgacgcgagcggatcggtcgtcatgggcaccggcgagcccggcgcgacgctgacg
gtgcgcgatgccgccgctacggtgctgggaaccgcgatcgtcactgcgcagggcgattat
agcgtcacgctcgcgaccccgcagatcgaccgtcaggcactgagcgtgtcgcaggccgat
gccgcgggcaatccgtcgcccgcgaccacgctgaccgccgccgacctgaccgcgccggcc
gcgccgctggccaccgtcgcgcccgatggactcacgctcaccggtacgggcgaggcgggg
gcgacgatcaccgtccgcgatccgctgggccgcgtggtgggtcaggcggtcgtcgcgggc
gacggcacctatatagtgccgctcgatccggcgcagaccaacggcgaagtgctgggggtc
gaccagcgggacgcggccggcaacggctcgcccatcgtgaccgcgatcgcaccggatctc
gtcgcggacaccacgcccgatgcgccgagcgccgcggtcgacgcggatggcgctgcggta
gcggggacggcgaatgccagcgccgcgatcatcgtctatgacgcggtcgggacaatcatc
ggcaccggcgtcgccggtccggacggaagctaccgtgtcgcgctcgtccccgcccggatc
gacggcgagacggtccgcgtcacgcagaccgacgcggacggcgacgtctcgccgcccgcc
accgcggtcgcgcccgacctgaccgcccccgccgcccccacggcaatcctcgatctgacg
ggaagcgtcgtcacgggcacgggcgagcctggcgcgacgatcacgatccgcgcggccgat
acgaccagtctggggaccgcgatcgtcggcgcgaacggcgcctatgcggtgacgctgacg
cccgcgcagatcgatggccagacgctggccgcgacacaggccgacgccgccggcaacata
tcgacgccattcgtgctgatcgcgcccgattacaccgcccccgccctgcccgtcgtcacg
atcgcaccggacggcagcacagcgaccgggatcggcgagccgggtgcgaccgtgacgatc
cgtctcggtgccgtcatcctgggtactgcacaggtcgccgcggatggaagctataccgcg
cagctgagccctgcgccggtcaatggcgagactctgtcggcgagccaggccgatcccacg
ggcaacgtctcggccgtcgcgaccgtcgcggcgcccgacatcaccgccccgccgccgccg
atcatttcggcgatcaccaacgacggcacgacgctgaccgggacgggcgaagctggcgca
cgggtcgaggtgcgcggtcccgatgccacgctgatcggcgtcgcgaccgtcgatgccgag
ggccgctatacggtcacgctggcgccggcacaggcagcgggcgggacgctcagcgtcacc
caggccgatgccacggggaatgtctcgaccccggccagcatcgccgccccgttcgacatc
gccgcgttcggtaatgtcgacgccgcgggactcgatctcctgccgaccacggcaccggtc
gatctggggaacgcgcgctatctcgcccttgtctcgctgggcctcgtcaacctcgacgcc
gaggtgctcgcggttcgcaacgtccgcttctcggtggcggagggccacagcctggatgca
cggttcacctatgacgcagcggcaacgatcggcgccgccagtgactatgcggtggtcgtg
cagcggctggtggggacgcagtgggtcgcggtcacaggcagcgggccggcctcgctgctc
gagattggtctgctcaacggcaatctcagcgcgaccgagacgctgggaccgggcgtgtac
cgggctttccttaccttccagggaacggcgggcgtcgggctactcggcgatctgtcggtt
gccgggatcgattcggacttcaccgatattgccggtgcaacgcccatcgcggcgagcggc
aacgtcatcaccgacgcgggcccgggtggcgagatcgacgtcacgggccccggaacccgc
gtcgccagcgtcacggtcaatggcgtgacgaccgacgtcggaccggacgggagcagcgtc
accggcacctggggcagcctgaggatcaaccccgacggcagctacagctacacccccgtc
gcgaatgccggcgcgatcgggcggaccgagacctttacctacacgctggtcgacccgacc
gatggcgagcgtgaaaccgcgacgctgacgatcgcgatcggcagcccggacatcaccggc
gcaccgcttgcggtcgccgaccaggcgtttgccgacgtgacgttccagaatgtcgtcacg
acgctgccgcccgccccggcgttcgacttcccgtcgaccgggaccatcctgacggggcag
gtcaccggcacgggcaccggcagtttcaccgtcgcccccgccgcggtgtcggatatcacg
atcgtcgccgcgcgaacgggtgggctgctctccgtactgccggcctataccgtcagcgtg
cgcagcgccgacggcctcatcgtgcggacggcaaccatcaatacggtgctgaacccggtg
ctcggcggcgtcgcgaccttcaccttcgacgacctgcccagtggcagctattcctaccag
gtcagcagcaacgcggcgctaagcgtcgggaatttcggcaccacggtatcgctgggctcg
agcaccctgttcctcaacgactacacgctggcgacgcgcgagaccgcgacgggcaatctg
ctcgacaatgacacgaccaataccagcttcgcggcgatccgcgtcgatcgcggcaccgga
tttgccgagatcggcgacaccccggtcacgctgaccggccgatatggcacgctgcaaatc
gatgagaccgggggctatgcctatcagcccagcgcgacgctcggcttctccgcggtcgat
ctcaccgacagcttcacctatcagctcgtccagcccaatggcgtgctgtccaccgcgacg
ctgaccgtgacgatcgacgtgcccggcgacggacctgccgctgcggcgggcttcgcatcg
gtagcatcggacgcgagcggtttcgcggaagtgaccgccctggtggaggccggggacctc
gacgtcatcccgctcgacgcgctgacggtacagagcatcgaatcgggcgcgttcgcggcg
gccggaccggtgatcgggctcgccacctatgatctgttcgagggtcaaggcgagttggag
gacgtgctgtcacagtatcttgcagcagaaccgcaagcatcgatcggagaagagcccgat
acggtttcgttcgatccgatcgtcgtcacggaaatcgccaccgtcgtcgatccgttcgat
tacctcgccactatcccggatcaggatcagaacggacttgtcaccagtcatgttgtataa
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integrated database retrieval system
