Sphingomonas aerolata: NEF64_10035
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Entry
NEF64_10035 CDS
T08450
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saer03009
]
NEF64_10035
Enzymes [BR:
saer01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NEF64_10035
Ribosome biogenesis [BR:
saer03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NEF64_10035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PSD5
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
USQ98822
LinkDB
All DBs
Position
2200066..2201262
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AA seq
398 aa
AA seq
DB search
MTSDPTTDTIVRVAARGDGITADGRHAAFTAPGDTLAADGSVTHGPHHQTPPCVHFPTCG
GCQLQHLDDESYSAFVTDRIASALDGQGLSAPIRTPHISPVRSRRRATLHAEAKGGRITL
GFTAEKAHLIVDIRECWILDPRLFALVAPLRTLLKRLNFRRRADIHLTLADQGADILITG
FAPEGLPAAEALTRFCEEHGIARVAFDDGLGPETRWEPDAVTITLGGVPVPLPPASFLQA
TPDGEAALTAAVLEAIGTPATVADLFAGLGTFTLAIPAKVYAAEGARDALTALKAAAHRL
QRPVFPEHRDLYRRPLTVAELDRFDAVVIDPPRSGAREQAGALAASRTPVIVYVSCNPAS
FARDAKELCDAGWRIDWIQPVGQFRWSTHVELAAKFVR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgacccaacgaccgacaccatcgtccgcgtcgccgcgcgcggcgacggcatc
accgccgatggccgccacgccgccttcaccgcgcccggcgacacgctcgcggccgacggc
agcgtgacccacggcccgcaccaccagaccccgccctgcgtccatttcccgacctgtggt
ggctgccagctccagcatctcgacgatgagagctacagcgccttcgtcaccgaccggatc
gcctccgcgctcgacgggcagggcctgtccgcgccgatccgcaccccgcatatctcaccg
gtccgcagccgccgccgcgcgacgctgcatgccgaggcgaagggcggcaggatcacgctc
ggcttcaccgccgagaaggcgcatctgatcgtcgacatcagggaatgctggatcctcgat
ccgcggctgttcgcgctcgtcgcccccttgcgcaccctgctcaagcgcctcaacttccgc
cgtcgcgcggacatccacctgacgctcgcggaccagggcgccgacatcctcatcaccggc
ttcgcgcccgaaggcctccccgccgccgaggcgctcacccggttctgcgaggagcacggc
atcgcccgcgtcgcgttcgacgacggtctggggcctgagacgcgctgggagcccgatgcg
gtgacgatcacgctgggcggcgtccccgtgccgctgccacccgcctcgttcctccaggcg
acgcccgatggcgaggccgcgctcaccgccgcggtgctcgaggcgatcggcacgcccgcc
accgtcgcagacctgttcgccgggctcggcaccttcacgctcgcgatcccggcgaaggtc
tatgccgcggagggcgcgcgcgacgcgctgaccgcgctgaaggccgccgcgcaccgtctg
caacgcccggtcttccccgagcaccgcgacctctaccgccgcccgctgacggtggccgag
ctcgaccggttcgacgcggtagtgatcgatccgccccgctcgggcgcgcgcgaacaggcc
ggcgcgctcgccgcgtccaggaccccggtgatcgtctacgtctcgtgcaacccggcgagc
ttcgcccgcgatgccaaggagctctgcgacgccggctggcggatcgactggatccagccg
gtcggccagttccgctggtcgacgcatgtcgaacttgctgcgaagttcgtccgctaa
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