Sphingomonas aerolata: NEF64_10415
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Entry
NEF64_10415 CDS
T08450
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
Organism
saer
Sphingomonas aerolata
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
DUF2800
Motif
Other DBs
NCBI-ProteinID:
USQ98889
LinkDB
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Position
complement(2277086..2280514)
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AA seq
1142 aa
AA seq
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MAVNSGELRTLPRLKGAQAAASDPRAHVWLSASAGTGKTQVLAARVFRLLLRGVDPGAIL
CLTFTKAGAAEMAQRINGRLAAWVRMPGPALGADLIALGEVPDQALQDRARTLFAKVLDA
PGGGLRIQTIHGFCQGLLAAFPVEAGLTPGFRPLESREEAGLAREALAGMLADAEREGRE
RPVEIVGRLSLRMGEGGAEGFLMACARALPALEALPSGVRPWLRRTLELPAGDIDEAVAD
WCEALDIDAITRIGAANRAWGTATGLKQAAMVEAWLASPDRAAMLPDLAGVVLTAKGEPR
KAQKKLIDLEPDYEILAQDVGAACADIASMIQRVAYADLLADGLEVGRDYARAYALAKRR
VGGVDFDDLIATTVALLDQPGIGEWVRYKLDQATEHVLIDEAQDTNADQWRIVRALADEF
FVGRGIYAPSTRTLFTVGDWKQAIFGFQGTDPFNFAAAELHFGRRALEVAGDDEWPEAER
GLPLERLSLTHSFRSTRPILTFVDAAVAAAGEPGLGAIGELEVHASEVKGPGSVTLWPTV
IAGGSEDDEEGWVDDAVRKLAGDIAKAVRRWLAPDGLMLESKGRRLRPEDVMILVKRRGD
LASLIVARLYAEGVPVAGVDRLRLNAPLAVQDLLATIRFVLQPEDDLSLASLLVSPLIGW
TQDELMAAAPREAGPLWRHLQRTQSAERLAPLLAMLARADIATPYQFLEELLSGPLDGRR
KLILRLGTEARDPIEELLNAALTFESNTTPSLQRFLDWFDRGDVDIVRDPSAPLDAVRVM
TAHGAKGLQAPLVILADATADPAAAPRSILKWTPEDMVAPLPVFRPRSSERGGPLDAVVT
AAERRELEEHWRLFYVAATRAEERLVIAGALGTRAQGVAPVTSWYGAADRALTALGVADA
EGERVFVGDGTELPVPVKPAANDVAVSSQTIPDWARHAAPKESRPSRPLSPSALGEDAVS
DPPPTPEMRRAAERGALIHKLLERLPAVDGGSRAAAADRWLGQAGGVSDPAARAEIAASA
IGVIEDPRFADLFGIDSLAEAPIAATLADGIVVSGTVDRLLIGAETIRVIDFKTGRRAPR
GLDEVPDYHLKQMAAYAAALRVIFPGRTIEAALLYTAAPRLIAISTEMLDRHKPRYAMTE
QS
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaatagcggcgagcttcgcacattgccccgtctgaaaggcgcgcaggcggcg
gcaagtgacccccgcgctcatgtctggctgtcagcatcggcggggaccggcaagacccag
gtcctggcggcgcgcgtcttccggctgctgctgcgcggtgtcgatccgggcgcgatcctg
tgcctgaccttcaccaaggcgggtgcggccgaaatggcgcagcggatcaacgggcggctc
gccgcctgggtgcggatgcccggccccgcgctgggcgccgatctgatcgccttgggggag
gtgcccgaccaggcgttgcaggatcgtgcgcggacgctgttcgccaaggtgctcgacgcg
ccggggggcgggttgcggatccagacgatccacggtttctgtcagggcctgctggcggcg
tttccggtcgaagccgggctgacgccgggttttcgccctctggagtcgcgcgaggaagcc
gggcttgcgcgtgaagcgctggcggggatgctagcggacgccgagcgtgaggggcgggaa
cgtcccgtcgagatcgttggccgcttgtccctgcgaatgggggagggcggtgctgagggg
ttcctgatggcgtgcgcccgcgcgctgcccgcgctcgaggcgttgccgtcgggtgtccgg
ccctggttgcgccggacgctcgaactgcccgccggcgatatcgacgaggcggtcgcggac
tggtgcgaggcgctggatatcgacgcgatcacgcggatcggcgcggccaaccgcgcgtgg
ggaaccgcgacagggctgaagcaggcggcgatggtcgaggcgtggctcgcgtcgccggac
cgtgcggcaatgctccccgatctcgcaggcgttgtgctgacggccaagggggagccgcgc
aaggcacaaaagaagctgatcgatctcgaacctgactatgagatcctggcacaggatgtc
ggcgcggcctgtgcggatatcgcgtcgatgatccagcgtgtggcctatgccgatcttctc
gccgacgggctggaggtcgggcgcgactatgcgcgtgcctacgcactcgcgaaacggcgt
gtcggcggggtcgatttcgacgatctgatcgcgacgaccgtggcgttgctcgaccagccc
ggcattggcgaatgggtccgctacaagctcgatcaggcgaccgagcatgtcctgatcgac
gaggcgcaggacaccaatgccgaccagtggcggatcgtgcgggcgctggccgacgagttc
tttgtcgggcgcggcatctatgccccctcgacgcgcacgctgttcacggtcggcgactgg
aagcaggcgatcttcggcttccagggaaccgacccgttcaacttcgccgccgcagagctg
catttcgggcgacgcgcgctcgaggtcgcgggcgacgacgaatggccggaggcggagcgg
ggcctgccgctcgagcggctgtcgctgacccactccttccgatcgacccggccgatcctc
acgttcgtcgatgccgcggtcgccgcggcgggcgagccggggcttggcgcgatcggcgag
ctcgaggtccatgcgagcgaggtcaagggcccgggcagcgtgacgctgtggccaacggtc
atcgcaggggggagcgaggacgacgaggagggctgggtcgacgatgcggtccgcaagctc
gcgggcgatatcgccaaggcggtccgacgctggctcgcgcccgatgggctgatgctcgag
agcaaggggcgacggctccgccccgaggatgtgatgatcctcgtgaagcggcgcggcgat
ctcgcgtcgctgatcgtcgcgcggctctatgccgagggcgtgcccgtcgcgggtgtcgac
cggctgcgcttgaacgcaccgctcgccgtccaggatcttctcgcgacgatccgcttcgtg
ttgcagccggaagacgatctgagcctggcatcgctgctcgtctcgccgctgatcggctgg
acgcaggacgagctgatggcggcggcgccacgtgaggccggcccgttgtggcgacatctt
cagcggacgcagtccgccgagcgccttgcgccgctgctcgcgatgctcgctcgtgcggac
atcgcaacgccatatcagtttctggaggagcttctgtccgggccgctcgacggacggcgc
aagctgatcctgcggctggggaccgaagcgcgcgatccgatcgaggaactgctcaatgca
gcactgacgttcgagagcaacacgacgccgtcgctgcagcgcttcctcgactggttcgat
cgcggcgatgtcgacatcgtccgcgatccatcggcgccgctcgatgcagtgcgcgtgatg
accgcgcacggtgccaagggcctgcaggcacccttggtgatcctcgccgatgcgaccgcc
gatcccgccgccgcaccgcgatcgatactgaaatggactcccgaggacatggtcgccccg
ctgccggtgtttcgaccgcgcagcagcgagcgggggggccccctcgatgccgtggtgacg
gcagccgagcggcgcgaactcgaggagcattggcggctcttctatgtcgcggcgacccgc
gccgaggaacgcctggtgatcgcgggtgcgctcggtacgcgggctcagggcgttgcgccg
gtgacgagctggtatggcgctgcggatcgcgcgctgacggcgttgggcgtggcggacgcg
gagggcgagcgggtcttcgtcggcgacgggacggagcttccggtaccggtaaagcccgcg
gcgaatgacgttgctgtgtcttcccagactatacctgactgggcccgacacgcggcaccg
aaggagtcgcgcccgtcgcgcccgttgtcgccatctgcgctcggcgaggatgcggtgtcc
gacccgccgccgaccccggagatgcggcgtgcggccgaacgcggcgcgttgatccacaag
ctgctcgagcgccttcccgctgtcgacggcggttcgcgggcggcggcggcggatcgctgg
ctcggccaggccggcggtgtttccgatcccgccgcgcgtgcggaaattgcagcgagcgcg
atcggcgtgatcgaggatccgcgcttcgctgacctgttcggtatcgactcgcttgccgaa
gcgccgatcgcggccacgctggcggacggcatcgtggtgtctggaacggtcgacaggctg
ctgatcggcgcggagaccatccgggtgatcgatttcaagaccgggcggcgtgcgccgcgt
gggctcgacgaggtgccggactatcatctcaagcaaatggcggcctatgcagcggcgttg
cgggtgatctttccggggcggacaatcgaggcggcgttactgtacaccgcggcaccccga
ttgatcgcgatatcgacggagatgctcgacaggcacaagccgcgctatgcgatgacggag
caaagctag
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