Sphingomonas aerolata: NEF64_11310
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Entry
NEF64_11310 CDS
T08450
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saer
Sphingomonas aerolata
Pathway
saer00061
Fatty acid biosynthesis
saer00071
Fatty acid degradation
saer01100
Metabolic pathways
saer01212
Fatty acid metabolism
saer02024
Quorum sensing
saer04146
Peroxisome
Module
saer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NEF64_11310
00071 Fatty acid degradation
NEF64_11310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NEF64_11310
09145 Cellular community - prokaryotes
02024 Quorum sensing
NEF64_11310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saer01004
]
NEF64_11310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saer04147
]
NEF64_11310
Enzymes [BR:
saer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NEF64_11310
Lipid biosynthesis proteins [BR:
saer01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NEF64_11310
Exosome [BR:
saer04147
]
Exosomal proteins
Exosomal proteins of breast milk
NEF64_11310
Exosomal proteins of breast cancer cells
NEF64_11310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
USQ99053
LinkDB
All DBs
Position
complement(2485323..2487026)
Genome browser
AA seq
567 aa
AA seq
DB search
MLDTDGRAIGVPLEGEARLLGDMLDTAVRRFGSRTVLDFLGSTMTYAELGDAVTHAARGL
QDLGVVKGTRVALCLPNTPYYPVLFFAVLKAGGIVVNVNPLYVERELCHLLKDSGAEIIA
TCDIIEIHARVLKVAGETGLRHVITCPIAGALPTLKSIAYRIFKRAEIAHAPNDARHRSF
DSLVRAKGAPAPVAVTPDEVAVLQYTGGTTGEPKAAMLSHANLVSNADAMMTFVGGETPE
QDRVMGALPLFHVFALTTVLTYSIRAGAQMILLPRFELQQLLKTIVRTKPTYFPAVPTIY
AAITKAAETQPIDLSSIHACISGGAPLPAEVRTAFEAATGSKLVEGYGLSEASPIITCNP
IEGLNKPGSAGLPFPGTIIEIRDREDPTRLLPVGENGEICARGPQVTQGYWHKPEASAAL
FADGALRTGDVGHLDADGYLFIVDRIKDLILCGGYNVYPRVIEEALYEHPAVAEVVVIGV
ADAYRGQAPKAFVTLVEGAVATPVELRDFLRDKISKIELPREVEIRDTLPKTLIGKLSKK
ELVAEEEARLARAMPAGAASGERGATP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaccgacggccgtgcgatcggcgtaccgctagaaggcgaagcgcgtttgctg
ggcgacatgctcgacacggcggtccgccgattcgggtcgcggacggtgctggatttcctc
gggtcgacgatgacctatgccgagcttggcgacgcggtcacgcatgcggcgcgggggctg
caggatctgggcgtggtgaaggggacgcgcgtcgcgctgtgcctgccgaacacgccctat
tatccggtgctgttcttcgcggtgctgaaggcgggcgggatcgtcgtcaacgtcaacccg
ctctatgtcgaacgcgagctgtgccacctgctgaaggattccggcgcggagatcatcgcg
acctgcgacatcatcgagatccatgcgcgcgtgctgaaggtcgcgggcgagacgggactg
cggcatgtcatcacctgcccgatcgcgggtgcgctgccgacgctgaagtcgatcgcctac
cgcatcttcaagcgcgccgagatcgcccacgcgccgaacgacgcgcggcatcgcagcttc
gactcgctggtgcgtgcgaagggcgcgcccgcgccggtcgcggtgacgccggacgaggtc
gcggtgctgcaatataccggggggacgaccggcgagcccaaggcggcgatgctgagccac
gccaatctggtgtcgaacgcggacgcgatgatgacgttcgtcggcggcgagacgcccgag
caggaccgggtgatgggggcgctgccgctgttccatgtcttcgcgctgacgacggtgctg
acctattcgatccgcgcgggtgcgcagatgatcctgttgccgcggttcgaactgcagcag
ctgctcaagacgatcgtgcggaccaagccgacttatttccccgcggtgccgaccatctat
gcggcgatcaccaaggcggcggaaacgcagccgatcgacctgtcgtcgatccatgcgtgc
atttcgggcggtgcgccgctgcccgccgaggtgcgtaccgcgttcgaggcggcgacgggg
tcgaaactggtcgagggctatggcctgtcggaggcctcgccgatcatcacctgcaatccg
atcgaggggctgaacaagccgggatcggcggggctgccctttcccggcacgatcatcgag
atccgcgaccgcgaggacccgacccggctgctgcccgtcggtgagaatggcgagatttgc
gcgcgtggcccgcaggttacgcaagggtattggcacaagccggaagcgagcgcggcgctg
ttcgcggacggggcgctgcgcaccggggatgtcgggcatctcgacgcggacggctatctg
ttcatcgtcgaccggatcaaggacctgatcctgtgcggcggctacaatgtctatccgcgg
gtgatcgaggaggcgctgtacgagcaccccgcggtcgccgaggtggtggtgatcggggtc
gccgacgcctatcgcggacaggcgcccaaggcgttcgtcacgctggtcgaaggtgcggtc
gcaacccctgtggaattgcgtgattttctccgcgacaagatcagcaagatcgagcttccc
cgcgaggtcgaaatccgcgacactctgcccaagacgttgatcggcaagctatccaaaaag
gaacttgtcgcggaggaagaggccaggctggcacgcgcgatgccggccggggcggcgtcg
ggggagaggggagcgacaccgtga
Sphingomonas aerolata: NEF64_16130
Help
Entry
NEF64_16130 CDS
T08450
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
saer
Sphingomonas aerolata
Pathway
saer00061
Fatty acid biosynthesis
saer00071
Fatty acid degradation
saer01100
Metabolic pathways
saer01212
Fatty acid metabolism
saer02024
Quorum sensing
saer04146
Peroxisome
Module
saer_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NEF64_16130
00071 Fatty acid degradation
NEF64_16130
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NEF64_16130
09145 Cellular community - prokaryotes
02024 Quorum sensing
NEF64_16130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
saer01004
]
NEF64_16130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saer04147
]
NEF64_16130
Enzymes [BR:
saer01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NEF64_16130
Lipid biosynthesis proteins [BR:
saer01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NEF64_16130
Exosome [BR:
saer04147
]
Exosomal proteins
Exosomal proteins of breast milk
NEF64_16130
Exosomal proteins of breast cancer cells
NEF64_16130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
USQ99904
LinkDB
All DBs
Position
3522037..3523827
Genome browser
AA seq
596 aa
AA seq
DB search
MPRQLEPFPNLVTMFFARAAERGDSPFLWTKQSGAWVATSWADAARQVASLATALTAIGL
KRGDRVMLVSENRPEWCLSDLAIMAAGCVTVPTYVTNTERDHLHIIENAGACAIIVSTAK
LAKTVLPAVLRSNQAQIVIGLEDMRVPAAIDFHNWHALIAAHPTKPETAAARATFTRDDL
ACIIYTSGTGGAPRGVMQHHGAILHNCAGCAAVISEDFGWDDEVFLSFLPLSHAYEHTGG
QHFPISLGGQIYYAEGLEKLAANIEETRPTIMFVVPRLFEVLRTRISKTIEKQGGASAYL
LARALDIGARRYAGKLRLIDRPAQAAVATLFKPKIAKKFGGRLKAMISGGAPLNPEVGLF
FESIGLTFLQGYGQTEAAPVISCNRPKAGVRMDSVGPPLKDTEVRIAEDGEILVRGELVM
HGYWRNDAETAKVLKDGWLHTGDVGEIDAQGRIRITDRKKDLIINDKGDNVAPQKIEGML
TLQPEIVQAMIAGDKRPYMVALIVPDPEWTQQWCASNGDACNFSRLAENSEFRTALGHAI
ERVNKDLTVTERVRRFVLADGPFTIENEQLTPSLKIRRHVIRQAYGGRLDALYLKG
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgccccgccagctcgaaccctttcccaacctcgtcaccatgttcttcgcgcgcgccgcg
gaaaggggcgactcaccgttcctctggaccaagcagagcggcgcctgggtggcgaccagc
tgggccgacgccgcgcgacaggtggcgagcctcgccacggccctcaccgcgatcgggctc
aaacgcggcgaccgggtgatgctggtcagcgagaaccgccccgaatggtgcctcagcgac
cttgcgatcatggcggcgggctgcgtgacggtgccgacctatgtcaccaacaccgaacgc
gatcacctccacatcatcgagaatgcgggcgcctgcgcgatcatcgtctcgaccgcgaag
ctggcgaagacggtgctccccgccgtcctgcgctcgaaccaggcgcagatcgtgatcggg
ctcgaggacatgcgagtccccgccgcgatcgacttccacaactggcacgcgctgatcgcc
gcgcacccgacgaagcccgagaccgcggcggcgcgcgcgaccttcacccgcgacgatctc
gcctgcatcatctacacctcgggcaccggcggcgcgccgcgcggcgtgatgcagcatcac
ggcgcgatcctgcacaattgcgcaggctgcgccgcggtcatctcggaggatttcggctgg
gacgacgaggtcttcctgtcgttcctccccttgagccacgcctatgaacataccggcggc
cagcatttcccgatctccttgggcggccagatctattatgccgaaggcctcgaaaagctc
gccgcgaacatcgaggagacgcgcccgacgatcatgttcgtcgtcccccgcctgttcgag
gtgctgcgcacgcgcatctcgaagacgatcgagaaacagggcggcgcgtcggcctatctg
ctcgcccgcgcgctcgacatcggcgccaggcgctatgccggcaagctccgcctgatcgac
cggccggcgcaggccgccgtcgcgacgctgttcaagcccaagatcgcgaagaagttcggc
ggccggctgaaggcgatgatctcgggcggcgcgccgctcaacccggaggtcgggctgttc
ttcgaatcgatcggcctcaccttcctccagggctatggccagaccgaggccgcgcccgtc
atctcgtgcaaccgccccaaggcgggcgtgcggatggattcggtcggcccgccgctcaag
gataccgaggtacggatcgccgaggatggcgagatcctggtccgcggcgagctcgtcatg
cacggctattggcgcaacgacgccgagaccgcgaaggtgctgaaggacgggtggctgcac
accggcgacgtcggcgagatcgacgcgcagggtcgcatccgcatcaccgaccgcaagaag
gacctgatcatcaacgacaagggcgacaatgtcgccccgcagaagatcgaggggatgctg
acgctccagcccgagatcgtccaggcgatgatcgccggcgacaagcgcccctatatggtc
gcgctgatcgtgcccgatcccgaatggacgcagcaatggtgcgcgtcgaacggcgatgcg
tgcaatttcagcaggctggccgagaacagcgagttccggaccgcgctgggtcacgcgatc
gaacgcgtgaacaaggatctgaccgtcaccgaacgcgtccgccgcttcgtgttggcggac
gggccgttcacgatcgagaacgaacagctgacgcccagcctcaagatccgccgccacgtc
attcgccaggcttacggcggccggctcgacgcgctctacctcaagggctga
DBGET
integrated database retrieval system