Sphingomonas aerolata: NEF64_12265
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Entry
NEF64_12265 CDS
T08450
Name
(GenBank) radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
saer
Sphingomonas aerolata
Pathway
saer00860
Porphyrin metabolism
saer01100
Metabolic pathways
saer01110
Biosynthesis of secondary metabolites
saer01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NEF64_12265
Enzymes [BR:
saer01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
NEF64_12265
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Motif
Pfam:
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
USQ99222
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All DBs
Position
complement(2712373..2713692)
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AA seq
439 aa
AA seq
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MWTYHPELLATPVPRYTSYPTAAEFGDDVGPADMKEALAAIAPGTVVSLYLHIPYCRDIC
WYCGCNTGAANRAARLATYVERLEREIALVAQQVTGIRVGRIAFGGGSPNAIPPAAFLRL
VERVRTAFDCTDAILSVEVDPRGFDRDWAGVIGRAGVSRVSLGVQTLDPQVQAAIGRVQP
SEDIRRTTALLRDAGVGSINFDLMYGLPQQSEQSLRASIVESIAMGPDRLAVFGYAHVPH
LVPRQRRIVADGLAGTAERFAQAALAHRMLVDAGYDPVGFDHFARPGDALAQAAASGGLR
RNFQGFTEDPAEILIGLGASAISDFPDKILQTEKNTGRYGMRIEAGALATCRGLRRSPED
RLRGRAIETILTRGTTDLTALSDGADIRRRLTPFERYGLIAWEGNVLRLSEDALPYARVI
ARSLDAYRQPASARFSHAV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtggacctatcaccccgaactgctcgcgacacccgtgccgcgctatacaagctatccg
accgctgccgagttcggcgacgatgtcggtccggccgacatgaaggaggcgctggcggcg
atcgcgccggggacggtcgtttcgctgtatctgcacatcccctattgccgggacatctgc
tggtattgcggatgcaacacgggggcggcgaaccgcgccgcgcggctcgccacctatgtc
gaacggctcgaacgcgagatcgcactcgtcgcgcagcaggtaactggcatccgcgtggga
cggatcgcattcggcggcggcagtccgaacgcgattccgccggcggcttttctccggctg
gtcgaacgcgtcaggacggcgttcgactgcaccgatgcgatactatcggtcgaggtcgat
ccgcgtggcttcgaccgcgactgggcgggggtgatcgggcgagcaggggtgtcgcgggtc
agcctcggcgtccagacgctcgacccgcaggtccaggcggcgatcgggcgcgtgcagccg
tcggaggatatccgtcgcacgacagcgctcctgcgcgatgccggtgtcgggtcgatcaat
ttcgatctcatgtatggcctgccgcaacagtccgagcaaagcctgcgcgccagcatcgtc
gagagcatcgcgatggggcccgaccggctcgcggtgttcggctatgcgcacgtcccgcac
ctcgtaccgcgccagagacgtatcgtcgcggacgggctggcggggacggcggagcgcttt
gcgcaggcggccctggcgcatcgcatgctggtcgatgccggctatgatccggtcgggttc
gaccatttcgcccgaccgggcgatgcgctcgcgcaggcggcggcgagcggcggcctgcgc
cgcaacttccagggtttcaccgaagacccggcggagatcctgatcggtcttggggccagc
gcgatcagcgactttcccgacaagatcctgcagaccgagaagaatacggggcgctacggc
atgcggatcgaagccggagcccttgcaacctgtcgcgggctgcggcgcagccccgaagac
aggctgcgcggccgggcgatcgagacgatcctgacccggggcacgaccgacctgaccgca
ctgagtgacggggcggacatccgcaggcgactgacgccgttcgaacggtacgggctgatc
gcctgggaggggaatgtgctccgcctgagcgaagacgcgcttccctatgcgcgcgtcatt
gcgcgcagcctggacgcctaccggcagcccgcgtcggcacgcttcagccatgcggtctag
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