Sphingomonas aerolata: NEF64_13435
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Entry
NEF64_13435 CDS
T08450
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saer03000
]
NEF64_13435 (pspF)
Transcription factors [BR:
saer03000
]
Prokaryotic type
Other transcription factors
Others
NEF64_13435 (pspF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
HTH_28
AAA
HTH_23
HTH_50
AAA_16
AAA_22
AAA_2
Motif
Other DBs
NCBI-ProteinID:
USQ99424
LinkDB
All DBs
Position
complement(2980427..2981488)
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AA seq
353 aa
AA seq
DB search
MERTTQVIGQSGAFMGALERASRAAALDRPVLVIGERGTGKELVAERLHRLSPRWDQPLV
IMNCAALPETLIEAELFGHEAGAFTGATKARVGRFEEAHGGTLFLDELGTLSMAAQDRLL
RAVEYGEITRIGSSRPLRVDVRIVAATNEHLPDKVMRHEFRADLLDRLSFEVVTLPPLRA
RAGDVMVLADHFGRRMASELGRERWEGFGPSARAALADYDWPGNVRELRNVVERAVYRWE
HEGPIDAIEIDPFQSPHRPRAADRKPVLPPAPASPSAGATNNAVEDDADNPVVACEDGPS
DFKSRVSRFERDLLSRALAEHRFNQRATAEALGLSYDQLRHALKRHELLHAGA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggagagaacaacgcaggttatcggccaatccggcgcgttcatgggagcgctcgaacgt
gcgtcgcgcgcggcggcgctcgaccgaccggtgctcgtgatcggggaacgcggtacgggc
aaggaactggtcgccgagcgactccaccggctgagcccgcgctgggaccagccacttgtg
atcatgaactgcgccgcgctgcccgagacgctgatcgaggcagaattgttcggacatgag
gccggcgcgttcaccggtgcgaccaaggcacgggtcgggcggttcgaggaggcacatggc
ggcaccctgttccttgacgagctgggcacgctgtcgatggcggcgcaggaccggttgctg
cgcgccgtcgaatatggcgagatcacccggatcggctcatcgcggccgctgcgcgtcgac
gttcgaatcgtggctgcgacgaacgagcatctgcccgacaaggtgatgcggcatgaattt
cgcgccgaccttctcgatcggttgtcattcgaggtcgtcacactgcccccgctgcgcgcg
cgggccggcgacgtgatggtgctagcggaccatttcggtcgacggatggcgtccgagctc
gggcgcgagcggtgggaggggttcggaccctccgcacgcgctgcgctggcagactatgac
tggcctggaaatgtccgtgagctgcgtaacgtcgtcgaacgcgcggtctatcgctgggag
catgaggggccgatcgatgcgatcgagatcgatccattccagtcgccgcacaggccacgt
gctgctgaccgcaagccggtcctgccaccagccccagcatcgccgtctgccggcgcgact
aataacgcggtagaggatgacgccgacaatccggtcgtcgcatgcgaggacgggccgtcg
gatttcaagtcgcgcgtgtcccggttcgagcgcgacctgctgtcgcgtgcgttggccgag
catcggttcaaccagcgggccaccgccgaggcgctcggtctcagctatgatcagttgcgg
catgccctgaagcggcacgaactgttgcacgccggcgcctga
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