Sphingomonas aerolata: NEF64_15020
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Entry
NEF64_15020 CDS
T08450
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
saer
Sphingomonas aerolata
Pathway
saer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NEF64_15020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saer03400
]
NEF64_15020
Enzymes [BR:
saer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NEF64_15020
DNA repair and recombination proteins [BR:
saer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NEF64_15020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
zf_Rg
AAA_30
Flavi_DEAD
Sterol_MT_C
Zn_ribbon_6
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
USQ99708
LinkDB
All DBs
Position
3277411..3279582
Genome browser
AA seq
723 aa
AA seq
DB search
MSSRARVLILNAALGPLDYRVPAGMDVAPGSIVVAPLGPRQLLGVVWEAERMPSDAEVGD
NRLRNLLAVSDVPPLGAPLRRLIEWTADYYLAPPASVLRMSLASTSALEGARTATEYRAT
GTIPPRLTPQREQALERIGDRQGLIRELAQLAEVSDAVIRGLVKVGGIEAVEVDIDSPYP
VPDPLHHVPTLSPDQRAAADSLVKGVADHIFTPTLLDGVTGSGKTEVYFEAVAQAIRDGR
QTLVLLPEIALTEPFLKRFHDRFGCEPIAWHSGLRSTQRRRAWRAIASGEALVTVGARSA
LFLPYRDLGLIVVDEAHETSFKQEEGVHYHARDVAVMRGKFEGCPVILASATPAIETRQQ
VATGRYAELKLPGRFGVAEMPTIEPIDLIKEPPERGRWLAPRLVQAMQATLEKREQALLF
LNRRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLTRRLACHHCGHAEPTPRVCPECQGEDT
LVACGPGVERIADEVAALFPEAKTAVVTSDTIWSPAKAAEFVDRMEAGDIDIVVGTQLVT
KGYHFPNLTLVGVVDADLGLDGGDLRAAERTFQQIRQVSGRAGRGEKPGHVFIQTHSPAA
QVMQALITGDADAFYAAETEARKDAGAPPFGRYAAIVVSSEDQRCAHDTANLVGRSAPQV
EGMHVYGPAPAPLAMLRGRHRYRLLVHAKRALDVQDVIRAWLGTLDWPAKVRVTVDVDPY
NFL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgcgcccgtgtcctgatcctcaacgccgccctcgggccgctcgactatcgc
gtgcccgcgggcatggacgtcgcgcccggctcgatcgtcgtcgcgccgctcggcccgcgc
cagctgctcggcgtggtgtgggaggcggagcggatgccgtccgatgcggaggtcggcgac
aaccgcctgcgcaatctcctcgcggtctcggacgtgccgccgctcggtgcgccgcttcgc
cggctgatcgaatggaccgccgattattatctggcgccccccgcctcggtgctgcggatg
tcgctcgcctcgacttccgcgctcgagggcgcgcgcaccgcgaccgaatatcgcgcgacc
ggcacgatccccccgcgcctgacgccgcaacgcgaacaggcgctcgaacggatcggcgat
cgccagggcctgatccgcgaactggcgcagctcgccgaggtgagcgacgcggtcattcgc
ggtctcgtcaaggtcggtgggatcgaggcggtcgaggtggatatcgacagcccctaccct
gtccccgacccgctgcatcacgtccccaccctgtcgcccgatcagcgcgcggcggcggac
tcgctcgtcaaaggcgtcgccgaccacatcttcacgccgaccttgctcgacggcgtgacc
ggttcaggcaagaccgaggtctatttcgaggcggtcgcgcaggcgatccgtgacggccgc
cagacgctggtcctgctccccgagatcgcgttgaccgagccgttcctcaagcgcttccac
gaccgcttcggctgcgagccgatcgcgtggcattcggggctgcgctccacccagcgccgc
cgcgcctggcgtgcgatcgcgagcggcgaggcgctggtgacggtcggcgcacgatccgcg
ctgttcctgccctatcgcgatctcggcctgatcgtcgtcgacgaggcgcacgagaccagc
ttcaagcaggaagaaggcgtgcattatcatgcgcgcgacgtcgcggtgatgcgcggcaag
ttcgaggggtgcccggtcatcctcgcgtccgccacgcccgcgatcgagacccgccagcag
gtcgcgaccggccgctatgccgaactgaagttgcccggccggttcggcgtggcggaaatg
ccgacgatcgaaccgatcgaccttatcaaggagccgcccgagcgcggccgctggctcgcc
ccgcggctggtccaggcgatgcaggcgacgctggagaagcgcgaacaggcgctgctgttc
ctcaaccgccggggctatgcaccgctgacgctgtgccgcacctgcgggcaccggttccag
tgtccgaactgcactgcgtggatggtcgagcaccggctgacgcggcggctcgcctgtcat
cattgcggccatgccgagccgacgccgcgcgtctgtcccgaatgccagggcgaggatacg
ctcgtcgcctgcggtcccggtgtcgagcggatcgcggacgaggtcgccgcgctgtttccc
gaggcgaagaccgcggtcgtcacgtcggacacgatctggtcgcctgccaaggcagcggaa
ttcgtcgaccggatggaggcgggcgatatcgacatcgtcgtcggcacgcagctggtgacc
aagggctatcacttccccaatctgacgctggtcggcgtcgtcgatgcggatctcgggctc
gacggcggcgacctgcgcgcggctgagcgcaccttccagcagatccgccaggtgtcgggg
cgtgccgggcgcggcgagaagcccggccatgtcttcatccagacgcacagccccgccgcg
caggtgatgcaggcgctgatcaccggcgacgccgacgccttttatgcggccgagaccgag
gcgcgcaaggatgcgggcgcgccgccctttggccgttatgccgcgatcgtcgtctcgtcc
gaggatcagcgctgcgcacacgacaccgccaatctcgtcgggcgaagcgcgccgcaggtc
gaggggatgcatgtctatggccccgcgcccgcaccgctcgcgatgctgcgcggccggcac
cgctaccgcctgctcgtccatgcgaagcgcgcgctcgacgtacaggacgtcatccgtgca
tggctcggcacgctcgactggccggccaaggtacgcgttaccgtcgacgtcgatccctat
aattttctctga
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