Sphingomonas aerolata: NEF64_15235
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Entry
NEF64_15235 CDS
T08450
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saer03016
]
NEF64_15235 (truB)
Enzymes [BR:
saer01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NEF64_15235 (truB)
Transfer RNA biogenesis [BR:
saer03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEF64_15235 (truB)
Prokaryotic type
NEF64_15235 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
USQ99748
LinkDB
All DBs
Position
3325706..3326614
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AA seq
302 aa
AA seq
DB search
MHGWIILDKPLGLGSTQGVSAVKRALRNGGYGKFKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKIYDFTIMFGVQTDTLDAEGVSIATSDVRPTKEAVEAVLAQFTGPIAQVPPA
YSALKVDGERAYDLARAGQDVVLASRNVTIHTLTPHLTRLLDDEVGEELKAVTLTAHVSK
GTYIRSLARDIALALGTVGHVTMLRRVKAGPFDLSSAISLDKLDELAKATALEDVLLPLR
VALDDIPALSLTPDQAGALRQGRILAGIAADDGQYFAELDTVPVALVEVEDGDVRVVRGF
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggatcattctcgacaagccgctgggcttgggctcgacgcagggcgtgtcc
gcggtgaagcgcgcgctgcgcaacggcggctatggcaagttcaaggttggccacggcggc
acgcttgatccgctcgcgaccggcgtgctgccgatcgcggtcggcgaggcgaccaagctt
gccgggcggatgctcgacagcgacaagatctatgatttcaccatcatgttcggggtccag
accgacacgctcgacgccgagggcgtaagcatcgccacctccgacgtgcgcccgacgaag
gaggcggtcgaggcggtgctggcgcagttcaccggcccgatcgcgcaggtgccccccgcc
tattccgcgctgaaggtcgatggcgagcgcgcctacgacctcgcccgcgccgggcaggac
gtggtgctcgccagccggaacgtgacgatccacacgctcaccccccacctcacccgtctt
ttggatgacgaggtcggggaggaactgaaggcggtcaccctcactgcgcatgtctccaag
ggcacctatatccgctccctcgcacgcgacatcgcgctggcgctcggaaccgtcggccac
gtcaccatgctacggcgcgtaaaggccggtccgttcgacctctcgtcagcgatatcgctg
gacaaactggacgaactcgctaaggccaccgcgcttgaagatgtactactgcccttgagg
gtggcgctggacgacatcccggctctctccctcacccccgaccaggcaggggcgctccga
caggggcgtatcttggccgggatcgccgcagacgatggccaatacttcgccgagctggac
accgtcccggtcgcgctggtcgaggtcgaggacggagacgtccgggtcgttcgcggtttc
aatctgtga
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