Sphingomonas aerolata: NEF64_15245
Help
Entry
NEF64_15245 CDS
T08450
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
saer
Sphingomonas aerolata
Pathway
saer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEF64_15245 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saer03019
]
NEF64_15245 (pnp)
03016 Transfer RNA biogenesis [BR:
saer03016
]
NEF64_15245 (pnp)
Enzymes [BR:
saer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NEF64_15245 (pnp)
Messenger RNA biogenesis [BR:
saer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NEF64_15245 (pnp)
Transfer RNA biogenesis [BR:
saer03016
]
Prokaryotic type
tRNA degradation factors
NEF64_15245 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
USQ99750
LinkDB
All DBs
Position
3327099..3329519
Genome browser
AA seq
806 aa
AA seq
DB search
MFDTKTVSAQWGGKTLTLETGRVARQANGAVLATLGETVVLCAVTAARTVKEGQDFFPLT
VHYQEKFSASGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVICQVLSY
DGENEPDILAMVAASAALTISGVPFMGPIGAARVGYVDGAYILNPTLDEAKAGDLDLVVA
ATGQAVMMVESEAKELSEEIMLGAVQFAHKACREAANLIIDLAEQAAKDPWEMAEQADLS
TAKDKLKKLIGKDIAAAYKVTDKSKRSDLLNAARAKGKTAFADATPQDQMAAGKLMKKLE
AEIVRGAILKDGTRIDGRTTTQIRPIEAMVHFLPRTHGSALFTRGETQSICTTTLGTRDA
EQMIDGLNGLSYENFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSKEEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGKNFAVLSDI
LGDEDHLGDMDFKVAGTSEGITTMQMDIKIAGITEEIMGKALAQAKEGRAHILGEMAKAL
DHTREELSAHAPRIETFTIEKSKIREVIGTGGKVIREIVAQTGAKVDIDDEGVIKVSSSD
PAQIEAAIKWIKGLVEEAEVGKVYDGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEK
VSDALSEGQEVKVKVLEIDPRGKVRLSMRVVDQTTGEELEDTRPAREPREGGDRGPRGPR
RDGDGGRDAGNGGGGRGPRGEGGGGDRGPRGPRRDGDGGRDGGNGGGRGPRRDGGGQGGE
RAPRAERSDGDKAPEFAPAFLTGDRD
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataccaagaccgtaagcgcccagtggggcggcaagacgctgacgctcgagacc
ggccgcgtggcccgtcaggcaaacggcgccgtgctcgccaccctcggcgagaccgtcgtt
ctgtgcgccgtcacggctgcacggaccgtcaaggaagggcaggatttcttcccgctcacc
gtccattaccaggagaagttctccgcaagcggccgcatccccggtggcttcttcaagcgt
gagcgcggcgcgaccgaaaaggagacgctgaccagccgtctcatcgatcgcccgatccgt
cccctcttcccagagggtttctacaacgagatcaacgtgatctgccaggttctgtcgtat
gacggcgagaacgagccggacatcctcgcgatggtcgcggcgtcggctgcgctgacgatc
tcgggcgtgccgttcatgggcccgatcggcgcagcacgcgtcggctatgtcgatggcgcc
tacatcctcaacccgacgctcgacgaagccaaggcgggtgacctcgacctcgtcgtcgcc
gccaccggccaggccgtgatgatggtcgaatcggaagccaaggagctctcggaagagatc
atgctcggcgcggtccagttcgcgcacaaggcttgccgcgaagccgccaacctgatcatc
gatctggccgagcaggctgccaaggatccttgggaaatggccgagcaggccgacctgtcg
accgccaaggacaagctgaagaagctgatcggcaaggacattgcggctgcctacaaggtg
accgacaagtccaagcgttcggacctgctgaacgccgcacgcgccaagggcaagaccgcc
tttgccgatgcgaccccgcaggaccagatggcggccggcaagctgatgaagaagctggag
gcggagatcgtccgcggcgccatcctcaaggacggcacccggatcgacggccgcaccacc
acgcagatccgtccgatcgaagcgatggtccacttccttccgcggacgcacggctcggcg
ctgttcacgcgcggcgagacgcagtcgatctgcaccaccacgctcggcacgcgcgacgca
gagcagatgatcgacggcctcaacggcctgtcgtacgaaaacttcatgctccactacaac
ttcccgccctactcggtcggtgaagtcggtcgcttcggtgcgccgggtcgtcgcgaagtc
ggccacggcaagctcgcttggcgcgcgctgcacccggtgctgccgtcgaaggaagagttc
ccgtacacgatccgcgttctgtcggacatcacggagagcaacggctcgtcgtcgatggcg
acggtctgcggcggttcgctgtcgatgatggatgcgggcgttccgcttaagcgtccggtg
tcgggcatcgcgatgggcctgatcctcgagggcaagaacttcgcggttctgtcggacatc
cttggcgacgaggatcacctcggcgacatggacttcaaggtcgccggcacgtccgagggc
atcaccacgatgcagatggacatcaagatcgccggcatcaccgaagagatcatgggcaag
gcgctggcacaggccaaggaaggccgtgcgcatatcctgggcgaaatggccaaggcgctc
gaccacacgcgtgaggagctgtcggcccatgcaccgcggatcgagaccttcacgatcgag
aagtcgaagatccgtgaagtcatcggcaccggcggcaaggtgatccgcgagatcgtcgcg
cagaccggcgccaaggtcgacatcgacgacgagggcgtgatcaaggtgtcgtcgtccgac
cccgcgcagatcgaagccgcgatcaagtggatcaagggcctcgtcgaggaagccgaagtc
ggcaaggtctatgacggcaaggtcgtcaacctggtggacttcggtgcgttcgtgaacttc
atgggtggcaaggacggtctcgtccacgtgtccgaaatcaagaacgagcgcgtcgagaag
gtctcggacgcgctgagcgaaggccaggaagtcaaggtcaaggtcctcgagatcgatccg
cgtggcaaggttcgcctgtcgatgcgcgtcgtcgaccagacgaccggcgaagagctggag
gacacgcgtcctgcccgtgagccgcgcgaaggcggtgaccgtggtccgcgcggtccgcgt
cgcgatggcgatggtggtcgtgacgccggtaacggcggtggcggtcgtggcccgcgcggc
gaaggcggcggcggtgatcgtggtccccgtggcccgcgtcgtgatggtgatggcggtcgt
gatggcggcaacggcggtggccgtggcccgcgtcgcgacggcggtggccagggcggcgag
cgcgctccccgcgccgagcgttcggacggcgacaaggcccccgagttcgctccggcgttc
ctgacgggcgatcgcgactaa
DBGET
integrated database retrieval system
