Sphingomonas aerolata: NEF64_15790
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Entry
NEF64_15790 CDS
T08450
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K02005
HlyD family secretion protein
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
NEF64_15790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_YknX
Beta-barrel_RND_2
Beta-barrel_AprE
BSH_RND
BSH_CzcB
BSH_CusB
DUF4407
Biotin_lipoyl
CzcB_C
YknX_C
HH_MFP_RND
Beta-barrel_RND
EAD5
Pil1
DivIC
Motif
Other DBs
NCBI-ProteinID:
USQ99847
LinkDB
All DBs
Position
complement(3442427..3443812)
Genome browser
AA seq
461 aa
AA seq
DB search
MADASIDDFLGVRPQAPWKRYIKWVAIAVGVVLLCLLLARCFGAKEQTQYSTQAAERGNL
TVTVSATGKLAPTNQVTVGSQLSGLVTKVVADVNDRVVAGQPLALIDPEQLDDQIRQGNA
QLAANQAQVNQAQATVAESRAQLNRLEEVARLSGGRVPSKTELQAGRADYQRALAAQKVA
EANVVASRAALAQSQTQRARAIIRSPVTGVVLARQIDPGQTVASSFNTPTLFVIAEDLTK
MKLEVAIDEADVGEVKIGQRANFTVDAFPGKTFPATITRVDLGSNLTVSSATSSSSSTST
TTTTGQVVSYAADLTVANPSLTLRPGMTATADIVTSDKQRVLLVPNAALRFKPTAASGDA
GGGIAGSLTFRPRRGGGAERTATLGRGAQQTIYVKGADGTPQPVQITTGDTNGTMTEVLS
GNLQPGAQVITGQLASGSDETKRGGGGRRGGGASKGGGGGQ
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcatcgatcgacgactttctgggcgtgaggccgcaggccccctggaaacgc
tatatcaaatgggtcgcgatcgcggtcggcgtcgtgctgctctgcctgctgctcgcgcgc
tgcttcggcgcgaaggagcagacgcaatattcgacccaggcggccgagcgcggcaacctg
accgtgaccgtgtccgcgacgggcaagctcgcaccgaccaaccaggtgacggtcgggtcg
cagctgtcggggctggtcaccaaggtggtcgccgacgtcaacgaccgcgtcgtcgcgggc
cagccgctcgcgctgatcgatcccgaacagctcgacgaccagatccgccagggcaatgcg
cagctcgccgccaaccaggcgcaggtgaaccaggcgcaggcgaccgtcgccgaatcgcgc
gcacagctcaaccggctcgaggaggtcgcgcggctgtcgggcgggcgcgtgccgtccaag
accgagcttcaggccggccgcgccgactatcagcgcgcgctcgccgcgcagaaggtcgcc
gaggccaatgtcgtcgccagccgcgccgcactcgcgcagagccagacgcagcgcgcgcgc
gcgatcatccgctcgccggtgaccggcgtcgtgctcgcgcggcagatcgatccgggccag
accgtcgcgtcgtcgttcaacacgccgacgctgttcgtgatcgccgaggacctgaccaag
atgaagctcgaggtcgcgatcgacgaggcggacgtcggcgaggtcaagatcggccagcgc
gccaacttcaccgtcgacgcctttcccggcaagaccttccccgcgacgatcacgcgtgtc
gatctcggctcgaacctgacggtcagctcggcgacgtcgtcgagttcgagcaccagcacg
acgaccaccaccggccaggtcgtgtcctacgccgccgacctgaccgtcgcgaacccgtcg
ctcacgctgcgcccgggcatgaccgcgaccgccgatatcgtcacctcggacaagcagcgc
gtgctgctcgtccccaacgcagcgctgcggttcaagccgaccgccgcgtcgggcgatgcg
ggcggcggcattgccggctcgctgaccttccggccgcggcgcggcggcggggcggaacgg
accgcgacgctcggccgcggcgcgcagcagaccatctatgtgaagggcgccgacggcacg
ccgcaaccggtgcagatcaccaccggcgacaccaacgggacgatgaccgaggtcctgtcg
ggcaatctccagcccggcgcgcaggtcatcaccggccagctcgccagcggctcggacgag
acgaagcgcggtggcggcggtcggcgcggcggcggcgcgagcaagggcgggggcggtggc
cagtaa
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