Sphingomonas aerolata: NEF64_15985
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Entry
NEF64_15985 CDS
T08450
Name
(GenBank) PAS domain-containing protein
Organism
saer
Sphingomonas aerolata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
Response_reg
HATPase_c
PAS_4
GAF
PAS
PAS_8
PAS_9
HisKA
GAF_2
GAF_3
HPTransfase
Motif
Other DBs
NCBI-ProteinID:
USQ99879
LinkDB
All DBs
Position
complement(3484538..3487804)
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AA seq
1088 aa
AA seq
DB search
MRPPLLDRDELLARQAFQLALVDLFRTMARPDDIMAAAAAALGSHLDVARCGYYEVSADG
AMTQGVSDWSNGTLPGLAATPDGDGDGDAALGAGVITDLRRGHTVIVDDCATDARARDPA
TARCWAQAGVGALIAAPLLRDGRLAAVLYLHEATPRDWTRADIALVEDVALRTSDAVDRV
RGEIAVKASEARYRSLFESIDAGFCVIEVLFADGAPYDYRFLEVNRAFARNTGLDDMIGR
TMRDVAPDMEQRWFDLYGHVATTGEPLRFEDPASALQDRWFEVYAYRVDAPELHHVAVLF
NDISERRRNEVALSESREELELATRVARLGRFDYRPADGMLRWDDRCRALFGIPAGAPVE
YESAFLANLHPDDRAAADAQVAAALDPRGTRMFDSEYRTIGQSDGVERHIVAHGIAFFDG
DIPIRLVGTVVDMSDDRRAQAALRETSERLRLASRATNDAIWDWDLRSNSVLWNEALTRA
YGHVLPDAKSTGDWWLDQVHPEDRARIHASIDAVIYGQDSDWTDEYRFACADGRYADVLD
RGYVIRDEDGAPTRMIGAILDQSTRKAAERQLRAINEGLAEAVEVSTADRDRLWELSSDI
MLRAEFDGTIVAANPAWTDMLGWSMDEIVGRQLFSLLHPDDVAHTGLAAAGIARGEAVAR
IDNRYAHKDGSYRWISWAARPGDGLINAVGRDVTADKEREAQLARAEDALRQAQKMEAVG
QLTGGIAHDFNNMLTGILGGLDMVRRNVPEPRPDKVDRYLEAATVSAQRAAGLTQRLLAF
SRRQSLDVKATDVDRLIADMEDLLARTLGENARLEIRRQDATWPVTTDANQLESALLNLA
INARDAMPEGGRLTIETENTHLDAHYTEAIGDLAPGDYVAIGVSDTGTGMSKAVIEKAFD
PFFTTKPIGQGTGLGLSMIYGFARQSGGHVRIYSEEGEGTTVKLYLPRFHGTAAVSVPTA
DRDLPRADGECVLVVEDDVAVRMLIVDILGSLGYGVMEAGDAHAAIPILESERRIDLLVS
DVGLPGMDGRQLAEVARRHRPDLRILFVTGYAEKAAVRGEFLGAGMEMITKPFALDVLAE
RIREMVAR
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccccctctgctcgatcgtgatgaactgctcgcgcgacaggcgttccagctcgcg
ctggtcgacctgttccgcacgatggcgcggcccgacgacatcatggcggcggccgccgcg
gcgctgggctcgcatctcgacgtcgcgcgctgcggctattacgaggtgtcggcggacggc
gcgatgacccagggcgtcagcgactggtcgaacgggacgctgcccggcctcgccgcgacg
ccagacggagacggggacggggacgcggcgctgggcgcgggcgtgatcaccgatctgcgg
cgcgggcacacggtgatcgtcgacgattgcgcgaccgacgcacgcgcgcgtgatcccgcg
accgcgcggtgctgggcgcaggccggcgtcggcgcactgatcgccgcgccgctgctccgc
gacgggcggctggcggcggtcctgtacctgcacgaggccacgccgcgcgactggaccagg
gcggatatcgcgctggtcgaggacgtcgcgctgcgcacctcggacgcggtcgaccgggtg
cgcggtgagatcgcggtgaaggcgagcgaggcacgctatcgctctctgttcgaatcgatc
gatgcggggttctgcgtgatcgaggtgctgttcgccgacggtgcgccgtacgactatcgc
ttcctcgaggtgaaccgggcgttcgcgcgcaacaccgggctcgacgacatgatcgggcgg
acgatgcgcgacgtcgcgcccgacatggaacagcgctggttcgacctgtacggccatgtc
gcgacgaccggcgagccgctgcggttcgaggatcccgcctccgcgctgcaggatcgctgg
ttcgaggtctatgcctaccgcgtcgatgcgcccgagctgcatcatgtcgcggtgctgttc
aacgacatcagcgagcgccgccgcaacgaggtcgcgctgtccgaaagccgtgaggagctg
gaactggcgacgcgggtcgcgcggctggggcggttcgactatcgaccggcggacggcatg
ctgcgctgggacgaccggtgccgcgcgctgttcgggatcccggcgggcgcgccggtcgag
tacgagtccgccttcctcgccaatctccaccccgacgaccgcgcggccgccgatgcgcaa
gtcgccgccgcgcttgatccgcggggcacgcggatgttcgattcggaatatcgcacgatc
ggccagagcgacggcgtcgagcgccatatcgtcgcgcacggcatcgcgttcttcgatggc
gatatcccgatccggctggtcgggacggtcgtcgacatgagcgacgatcgccgcgcacag
gcggcgctacgcgagacgagcgagcggctgcggctggccagccgcgcgaccaacgacgcg
atctgggactgggacctgcggagcaattcggtgctgtggaacgaggcgctgacgcgcgcc
tatggccatgtcctgcccgatgcgaagtcgaccggcgactggtggctggaccaagtccat
ccggaggaccgcgcgcggatccatgcgagcatcgatgcggtgatttacgggcaggacagc
gactggaccgatgaataccgcttcgcctgcgccgacggccgctatgccgatgtgctcgac
cgcggctacgtcatccgcgacgaggacggcgcgccgacgcggatgatcggcgcgatcctc
gaccagtcgacgcgcaaggcggcggagcgccagctgcgcgcgatcaacgagggactggcc
gaagccgtcgaggtgtcgaccgccgaccgcgaccggttgtgggaattgtcgtccgacatc
atgctgcgcgccgagttcgacggcacgatcgtcgccgccaatcccgcctggaccgacatg
ctgggctggtcgatggacgagatcgtcggacgccagctcttctcgctgctccaccccgac
gacgtcgcgcataccggcctggccgcggcggggatcgcccgcggcgaggcggtcgcgcgg
atcgacaatcgctatgcccacaaggatggcagctatcgctggatcagctgggcggcgcgg
ccgggcgacgggctgatcaacgcggtcgggcgcgacgtcactgcggacaaggagcgcgag
gcacagctcgcgcgcgccgaggatgcgctgcgccaggcgcagaagatggaggcggtcggc
cagctgaccggcggtatcgcgcatgatttcaacaacatgctgaccggtatcctgggcggg
ctcgacatggtccggcgcaacgtgcccgaaccgcgcccggacaaggtcgaccgctatctg
gaggcggcgacggtctccgcgcagcgcgccgcgggcctgacgcagcggctgctcgccttt
tcgcggcgccagtcgctcgacgtgaaggcgaccgatgtcgaccggctgatcgccgacatg
gaggatctgctcgcacggacgctcggcgagaatgcgcggctcgagatccggcggcaggac
gcgacctggccggtgacgacggatgccaaccagctcgaaagcgcgctgctcaacctcgcg
atcaacgcgcgcgacgcgatgcccgagggcgggcggctgacgatcgagaccgagaacacg
catctcgacgcgcactataccgaggcgatcggcgatctcgcgcccggcgactatgtcgcg
atcggcgtcagcgacaccggcacgggcatgtcgaaggcggtgatcgagaaggcgttcgac
ccgttcttcacgaccaagccgatcgggcagggcaccgggctcggcctgtcgatgatctat
ggctttgcgcgccagtcgggcgggcatgtccggatctattcggaggagggcgagggcacg
acggtcaagctgtacttgccgcgcttccacggcaccgccgcggtcagcgtgccgaccgcg
gaccgcgacctgccgcgcgcggacggcgaatgcgtgctggtggtcgaggacgatgtcgca
gtgcggatgctgatcgtcgatatcctcggcagcctcggctatggcgtgatggaggcgggc
gacgcgcacgcggcgatcccgatcctcgaaagcgagcggcggatcgacctgctggtcagc
gatgtcggcctgcccgggatggacgggcgccagttggccgaggtcgcgcggcggcatcgg
cccgatctgcggatcctgttcgtcaccggctatgccgaaaaggcggcggtgcgcggcgag
tttctgggtgcggggatggagatgatcaccaagccgttcgcgctcgacgtgctcgccgaa
cggatccgcgagatggtcgcgcgctga
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