Sphingomonas aerolata: NEF64_16180
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Entry
NEF64_16180 CDS
T08450
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saer03016
]
NEF64_16180 (miaB)
Enzymes [BR:
saer01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NEF64_16180 (miaB)
Transfer RNA biogenesis [BR:
saer03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NEF64_16180 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
USQ99914
LinkDB
All DBs
Position
3532413..3533732
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AA seq
439 aa
AA seq
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MTSKPKTYHVKSFGCQMNVYDGERMAELMAADGLTQADAVDADIVVLNTCHIRERATEKV
YSDIGRLRKDQLRKNGKTPMIAVAGCVAQAEGQEIFTRAKVDVVVGPQAYHNLPDLVAKA
AAGTPSLDTDMPLLSKFGALPTRRKVAPSAFLTVQEGCDKFCTYCVVPYTRGAEISRPFA
AIVDEAKALVDAGAREITLLGQNVNAWSEDERGLHDLIRDLDRIPGLARIRYTTSHPNDM
TQGLIDAHRDVESLMPFLHLPVQAGSDRVLKAMNRSHTRDSYLRMLDRVRAVRPDIALSG
DFIVGFPGETDAEFEDTLSLVDAVGYAQAYSFKYSPRPGTPAAAIVEQVPEAVMDERLQR
LQAALNRDQHAFNAATVGRTCTVLLERPGKLPGQLIGKSPWLQSVHLIGDHAIGDLVEVT
LAAAGPNSLTGIERIAQAA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgaaacccaagacctatcacgtcaagtcgttcggctgccagatgaacgtctat
gacggcgagcgcatggccgaactgatggccgccgacgggctgacccaggccgatgcggtc
gatgccgacatcgtcgtgctcaacacctgccacatccgcgagcgcgcgaccgaaaaagtc
tattcggacatcggccggctgcgcaaggatcagctgcgcaagaacggcaagacgccgatg
atcgcggtcgccggctgcgtggcgcaggccgagggtcaggagatcttcacccgcgccaag
gtcgacgtcgtcgtcggcccgcaggcctatcacaacctccccgacctcgtcgcaaaggcc
gcggcgggcacgccgtcgctcgacaccgacatgccgctgctgtcgaagttcggcgcgctc
ccgacccgccgcaaggtcgcgccgtccgcgttcctgaccgtgcaggaaggctgcgacaag
ttctgcacctattgcgtcgtcccctatacccgcggcgccgagatcagccggcccttcgcg
gcgatcgtcgacgaggccaaggccctggtcgacgcaggcgcgcgcgagatcacgctgctc
ggccagaacgtcaacgcctggagcgaggatgagcgcggcctccacgacctgatccgcgac
ctcgatcgcatccccggtcttgcgcggatccgctacaccaccagccaccccaacgacatg
acgcaggggctgatcgacgcgcaccgcgacgtcgagagcctgatgccgttcctccacctt
cccgtccaggcgggcagcgaccgcgtgctcaaggcgatgaaccgcagccacactcgcgac
tcctatctccgcatgctcgaccgcgtccgcgcggtgcgccccgacatcgcgctgtcgggc
gacttcatcgtcggcttccccggcgagaccgatgccgaattcgaggacacgctgagcctg
gtcgacgcggtcggctatgcgcaggcctacagcttcaaatacagcccgcgccccggcacc
cccgccgccgcgatcgtcgagcaggtccccgaggctgtgatggacgagcgtctccagcgc
ctccaggccgcgctcaaccgcgaccagcacgcgttcaacgccgccaccgtcggccgcacc
tgcaccgtgctgctcgaacgccccggcaagctccccggccagctgatcggcaagtcgccc
tggctgcaatcggtccacctgatcggcgaccacgcgatcggcgatctggtggaggtcacg
ctcgcggcggccgggcccaattcgctgacgggcatcgaacgcatcgcgcaggccgcctga
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