Sphingomonas aerolata: NEF64_16315
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Entry
NEF64_16315 CDS
T08450
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saer02000
]
NEF64_16315
Transporters [BR:
saer02000
]
Other transporters
Pores ion channels [TC:
1
]
NEF64_16315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
USQ99938
LinkDB
All DBs
Position
3558242..3560425
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AA seq
727 aa
AA seq
DB search
MRKTFIGISALAVFAATAATAQTDTPPTGAPADTPAAAPAPAPTRTPAPRAAAEILVTAP
VRQSETDVLQGTSILSGAELTRNLRPTIGETLARQPGVSATSFGPSASRPILRGFQGERI
RVLTDGIGSIDVSNTSVDHAVIIDPLLAERIEVLRGPSALLFGSSAVGGVVNVIDTRIPR
TVPENGYRVNGIATYGSAANERSGGAAGDVAVGQHLVLHADGSYLKSGNLRTGGNILSSQ
ARAAALSQVGLPQDTDEPIDFAGSAALRGKLPNTQSETWTAGLGAAIITDGGNLGVSYSH
YDSLYGVPIRYATAVGQEQEAPRLDVVQNRVDLRGEINTGGGFLDKIRVRAGHATYRHFE
LEPDGGVGTAFFNNGTEGRIELVQANRGGWQGASGVQYFNRLFDVNGDEAFLPRNETNQT
GLFTLQQYSAGAFRAEGGLRYETTSLSAKTPLDDLRFFRGSRSFDAVSGSLGASYGVTDA
VRLGVNLSHTERAPSAEELFANGGHAGTQAYEFGSPDFKLEKSWGIEGTLHAHGDGFSFD
ASAYYNDFSNYISENQVAQSVCQTAADPSGREVDLPCFQYQQADARYYGFEANASVRLAQ
IGGYVLNADLLGDYVRATIVDNGPVPRIPPMRVLGGIEAQGDRVNGRLEVEHVFDQDRIA
AFETTTNGYTMVNATLGFNPFGKDSKTSILLSANNLFDVEARRHASFLKDFAPLAGRDIR
ATLRFGL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagactttcatcgggatcagcgcgctggcggtcttcgccgcgaccgccgcgacc
gcccagactgacacgccgccgaccggcgcaccggccgatacgcctgccgcagccccagcc
ccagccccgacccgcacccccgccccgcgcgcggccgccgagatcctcgtcaccgccccc
gtccgccagagcgagaccgacgtcctccagggcacctcgatcctctcgggcgccgagctc
acccgcaacctgcgcccgaccatcggcgagacgctcgcgcgccagcccggcgtgtccgcc
acctcgttcggccccagcgcctcgcgcccgatcctgcgcggcttccagggcgagcgcatc
cgcgtgctgaccgacgggatcggctcgatcgacgtctcgaacacctcggtcgatcacgcg
gtcatcatcgacccgctgctcgccgagcggatcgaggtgctgcgcggcccctccgccctc
ctgttcggctcgtccgcagtcggcggcgtcgtcaacgttatcgacacgcgcatcccgcgc
accgtccccgaaaacggctaccgcgtgaacggcatcgccacctacggctcggccgcgaac
gagcgctcgggcggcgccgccggcgacgtcgcggtcggccagcacctcgtcctccacgcc
gacggctcctatctgaagtcgggcaatctgcgcaccggcggcaacatcctgtcgtcgcag
gcgcgcgccgccgcgctcagccaggtcggcctgccgcaggacaccgacgaaccgatcgac
ttcgccggctccgccgcgctccgcggcaagctgcccaacacccagtccgagacctggacc
gccggcctcggcgccgcgatcatcaccgacggcggcaatctcggcgtgtcgtacagccat
tatgacagcctctacggcgtgccgatccgctacgcgaccgcggtcggccaggagcaggag
gcgccccgcctcgacgtcgtccagaaccgcgtcgacctgcgcggcgagatcaacaccggc
ggcggtttcctcgacaagatccgcgtccgcgcgggccacgcgacctatcgccatttcgag
ctcgaacccgatggcggcgtcggcaccgccttcttcaacaacggcaccgaaggccggatc
gagctcgtccaggccaatcgcggcggatggcagggcgcgtccggcgtgcaatatttcaac
cgcctgttcgacgtgaacggcgacgaagccttcctgccgcgcaacgagaccaaccagacc
ggcctcttcacgctccagcaatatagcgccggcgcgttccgggccgagggcgggctgcgc
tacgagacgacgtcgctctccgccaagacgccgctcgacgacctccgcttcttccgcggc
agtcgcagctttgacgcggtctcgggctcgctcggcgcctcctacggcgtgaccgacgcg
gtccgcttgggcgtcaacctctcgcacaccgagcgcgcgccgtcggccgaggagctgttc
gcgaacggcggccatgccggcacccaggcctatgaattcggcagccccgatttcaagctc
gagaagagctggggcatcgagggcacgctccacgcgcatggcgacggcttcagcttcgac
gcgtccgcctattacaacgacttctccaactatatctcggagaaccaggtcgcgcagagc
gtctgccagaccgccgccgatccgtcggggcgcgaggtcgacctgccctgcttccagtat
cagcaggccgatgcgcgctattacgggttcgaggccaatgcctcggtccggctcgcgcag
atcggcggctatgtgctgaacgccgacctgctcggcgattatgtccgcgcgacgatcgtc
gacaacggccccgtcccccgcatcccgccgatgcgcgtgctcggcgggatcgaggcacag
ggcgaccgcgtcaacggccggctcgaggtcgagcacgtcttcgaccaggaccgcattgcc
gcgttcgagacgaccaccaacggctacacgatggtcaacgcgaccttgggcttcaacccg
ttcggcaaggacagcaagacctcgatcctgctcagcgcgaacaacctgttcgacgtcgaa
gcccgccgccacgccagcttcctcaaggacttcgcccccctagccggccgcgacatccgc
gcgacgctccgcttcgggctgtaa
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