Sphingomonas aerolata: NEF64_17860
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Entry
NEF64_17860 CDS
T08450
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
saer
Sphingomonas aerolata
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saer03400
]
NEF64_17860
Enzymes [BR:
saer01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NEF64_17860
DNA repair and recombination proteins [BR:
saer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NEF64_17860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
USR00217
LinkDB
All DBs
Position
complement(3898024..3899562)
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AA seq
512 aa
AA seq
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MRSKKTTLVPILGDQLSLQIASLNGADPAATIVLMMEVADETTYVRHHRRKIAYILSAMR
HHAEALREAGWTVDYVTLDDPESTGSFTGEVARAIGRHHPARIIVTEAGEWRVAGMLDAW
ETLFGLPVEIRADDRFLASHAEFEAWAEGRKQLRMEYFYREMRRRTGLLMDGDKPEGGEW
NYDAENRKPAKADLLMPRPLSFAPDAITTAVLAMVAARFGEHPGSLDAFDFATTREDALK
QQRHFLKHALPRFGDYQDAMLTDQPFLWHAVLSPYINSGLLDPVDLCRAVEAEYAAGRVP
LNCAEGFIRQIIGWREYMRGIYWREGPDYVERNFLDARRDLPGFYWTGETDMHCLSQAIG
QTLDHAYAHHIQRLMVTGNFALLIGADPKQVHEWYLEVYADAYEWVELPNTLGMSQFADG
GLLGSKPYAASGAYINRMSDYCVHCRYDVKQRVGPDACPFNALYWDFLVRNAEKLDRNPR
LAMPYRNWAKMKPADQDATLTQAKEFLARLDG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcgctccaagaaaaccacgctcgtgccgatcctcggcgaccagctctcgctgcagatc
gcttctctgaacggggccgacccggcggcgacgatcgtgctgatgatggaggtcgccgac
gagacgacctatgtccgccatcatcgccggaaaatcgcctatattctgtcggcgatgcgg
catcacgccgaggcactgcgcgaggcgggctggaccgtcgactacgtcacgctcgacgat
ccggagtcgaccggcagcttcaccggcgaggtcgcgcgcgcgatcgggcggcatcatccg
gcgcgaatcatcgtcaccgaagcgggcgagtggcgcgttgcaggcatgctggacgcgtgg
gaaacgctgttcggcctgccggtcgaaatccgcgccgacgaccgcttcctcgccagccat
gccgagttcgaggcctgggcggaggggcgcaagcagttgcggatggagtatttctaccgc
gagatgcgccgccgcaccgggttgctgatggatggcgacaagcccgaggggggcgagtgg
aattacgatgcggagaaccgcaagcccgccaaggccgacctgctgatgccgcgcccgctc
tcctttgcccccgatgcgatcacgaccgcggtgctcgcgatggtcgcggcgcggttcggc
gagcatccaggcagcctcgatgcgttcgacttcgcgacgacgcgtgaggacgcgctcaag
cagcagcggcattttctcaagcacgcgctgccgcggttcggggattatcaggatgcgatg
ctgaccgaccagccgttcctgtggcacgcggtgctgtcgccctatatcaattcggggctg
ctcgatccggtcgatctgtgccgtgcggtcgaggcggaatatgccgccgggcgtgtgccg
ctcaactgtgccgaggggttcatccgccagatcatcggctggcgcgaatatatgcgcggc
atctactggcgcgaggggccggattatgtcgagcgcaacttcctggatgcgaggcgagac
ctgcccggcttctactggactggcgagaccgacatgcactgcctgtcgcaggcgatcggg
cagacgctcgaccatgcctatgcgcatcacatccagcggctgatggtgacgggcaatttc
gcgctgctgatcggcgcggaccccaagcaggtccatgaatggtatctggaggtctatgcc
gatgcgtatgaatgggtcgagctgcccaatacgctggggatgagccagttcgcggatggc
gggttgctcgggtcgaagccctatgcggcgtcgggggcgtatatcaaccggatgtcggat
tattgcgtgcattgccgctatgacgtgaaacagcgcgtcggccccgacgcctgcccgttc
aacgcgctctactgggatttcctggtgcgcaacgcggagaagcttgatcgcaacccgcga
ctggcgatgccgtatcgcaactgggctaagatgaaaccggcggaccaagacgcgacgctt
acacaggcaaaggaatttctggcgcggctcgacggctga
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