Sphingomonas aerolata: NEF64_17990
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Entry
NEF64_17990 CDS
T08450
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
saer
Sphingomonas aerolata
Pathway
saer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEF64_17990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saer03019
]
NEF64_17990 (groL)
03110 Chaperones and folding catalysts [BR:
saer03110
]
NEF64_17990 (groL)
03029 Mitochondrial biogenesis [BR:
saer03029
]
NEF64_17990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
saer04147
]
NEF64_17990 (groL)
Enzymes [BR:
saer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NEF64_17990 (groL)
Messenger RNA biogenesis [BR:
saer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NEF64_17990 (groL)
Chaperones and folding catalysts [BR:
saer03110
]
Heat shock proteins
HSP60 / Chaperonin
NEF64_17990 (groL)
Mitochondrial biogenesis [BR:
saer03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NEF64_17990 (groL)
Exosome [BR:
saer04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NEF64_17990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NEF64_17990 (groL)
Exosomal proteins of breast cancer cells
NEF64_17990 (groL)
Exosomal proteins of colorectal cancer cells
NEF64_17990 (groL)
Exosomal proteins of bladder cancer cells
NEF64_17990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
USR00241
LinkDB
All DBs
Position
complement(3932120..3933760)
Genome browser
AA seq
546 aa
AA seq
DB search
MASKDVKFGRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVVKVVEDVKARSKPVSGSKEVAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMTVELQDPYILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTKGEM
ISEDLGIKLETVTLGMLGTAKRVTIDKDNTVIVDGAGDHETIKGRTEAIRRQIENTTSDY
DKEKLQERLAKLAGGVAVIKVGGSSEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKVLDGLTGANEDQTRGIDIVRKSLTALVRQIAQNAGHDGAVVSGKLLDGNDSNIGFN
AATDTYENLVEAGVIDPTKVVRTALQNAASVAGLLITTEAAVSEMAEDKPAMPMGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaggacgtaaaattcggtcgtgacgcgcgcgagcgcatcctccgcggcgtc
gacatcctcgccgacgcggtcaaggtgaccctggggcccaagggccgcaacgtcgtcatc
gacaagagcttcggcgcaccgcgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcaaggacaagttcgagaacatgggcgcgcagatgctgcgcgaagtggcctcgaag
accaacgacatcgccggtgacggcacgaccaccgcgacggtcctggcgcaggccatcgtc
cgcgagggcatgaagtcggtcgcagcgggcatgaacccgatggatctgaagcgcggcatc
gatctcgccgtcgtcaaggtcgtcgaggacgtcaaggcgcgttcgaagccggtttcgggt
tcgaaggaagtggcgcaggtcggcatcatctcggccaatggcgaccgtgaagtcggcgag
aagatcgccgaagccatggagaaggtcggcaaggaaggcgtgatcaccgtcgaggaggcc
aagggtctcgaattcgagctcgacgtcgtcgaaggcatgcagttcgaccgcggctatctc
tcgccctacttcatcaccaaccccgagaagatgaccgtcgagcttcaggatccctacatc
ctgatccacgagaagaagctctcgaacctgcaggcgatgctcccgatcctggaagccgtc
gttcagtcgggtcgtccgctcctgatcatcgccgaggacatcgagggtgaggcactcgcc
acgctcgtcgtcaacaagctgcgcggcggcctgaaggtcgcagcggtcaaggcacccggc
ttcggcgatcgtcgcaaggcgatgctcgaggacatcgcgatcctgaccaagggcgagatg
atctcggaagacctcggcatcaagctcgagaccgtcacgctcggcatgctcggcaccgcc
aagcgcgtcacgatcgacaaggacaacaccgtcatcgtcgacggtgccggcgatcacgag
acgatcaagggccgtaccgaagcgatccgtcgccagatcgagaacaccaccagcgactat
gacaaggagaagctccaggagcgtcttgccaagctcgccggcggcgttgccgtgatcaag
gtcggcggttcgtcggaagtcgaagtcaaggagcgcaaggaccgcgtcgacgacgcgctg
cacgcaacccgcgcagccgtcgaagagggcatcgtccccggtggtggtacggcgctgctg
tacgcgaccaaggtgctcgacggcctgaccggtgcgaacgaggaccagacgcgcggtatc
gacatcgtccgcaagtcgctgaccgctcttgttcgccagatcgcgcagaatgcgggtcat
gacggtgcggtggtttcgggcaagctgctcgacggcaacgactcgaacatcggcttcaac
gccgcgaccgacacctacgagaacctggtggaagccggcgtgatcgatccgaccaaggtc
gtccgcaccgcgctgcagaacgcggcatcggtcgcaggcctgctgatcacgaccgaagcg
gccgtgagcgaaatggccgaagacaagcccgccatgcccatgggcggcggcatgggcggc
atgggcggcatggacttctga
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