Sphingomonas aerolata: NEF64_18465
Help
Entry
NEF64_18465 CDS
T08450
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
saer
Sphingomonas aerolata
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
USR02237
LinkDB
All DBs
Position
unnamed1:complement(36138..37688)
Genome browser
AA seq
516 aa
AA seq
DB search
MPRRRISPLFAVFVAFVVLMASNAWLKGIFGYGEIATDIPFLLAGAILFLAWRFNRRAAN
QRSDLLGSARFGDRTDVRKLEANGDLLIGRSAKSGKLLHYDGAAHLLTMAPTRSGKGVGT
IIPNLLLLDRSVICIDPKGENARVTARARAAKGKVWCLDPFGVSGQPPARYNPLDRLDPA
SLDLAEDANTLADALVHDAPGQSGEAHWNEEAKALIAGLILHTVVHEPADARVLATVRDK
LTLAPAGFAALLAKMQDSAGAGGLIARAANRQLGKSDREAAGVLSSAQRHTHFLDSPRIV
ASTAASDFTFAGLKDTTATVFLCLPPDRLDTYARWLRLLVSQAVTDMARSTARPARPVLF
LLDEFAALGRLEPVERAMGLMAGYGLQLWPILQDMHQLKATYGERAGTFMSNAGVIQTFG
VNDHATADMLSRTIGDTTIEYDTVSTSRGTGWGENRAGPSESVSGHVSARRLATPDEIMR
MRPDQLLLLRQGENPLAVEKIRYYDQREFTGLFDPA
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggcgacggatcagcccgctgttcgcggtcttcgtcgccttcgtggtgctgatg
gcgagcaacgcctggctcaagggcatcttcggctatggtgagattgcgaccgacattccg
ttcctgctggccggcgcgatcctgttcctggcttggcgcttcaaccggcgcgccgccaac
cagcggagcgatctgctcggctccgctcgtttcggcgaccgaaccgacgtgcgaaagctg
gaggcgaacggagatctcctgattggccgctcggcgaagtcaggcaagctgctgcattac
gacggcgcggcgcatctgctaacgatggcacccacccggtcgggcaagggcgtcggcacg
atcattcccaacctgctgctgctcgatcgctcggtgatctgcatcgaccccaagggtgag
aatgcccgcgtcaccgcccgtgcgcgtgccgccaagggcaaggtctggtgcctcgatccg
ttcggcgtgtcgggtcagccgcctgcccgctacaatccgctcgaccggctcgatcccgcc
agcctcgatctcgcggaagatgccaacaccctcgccgacgccctagtgcatgacgcgccg
gggcaatcgggcgaagcgcattggaacgaggaagccaaggcgctgatcgcggggctgatc
ctgcataccgtcgtccacgaacccgccgacgcccgagtgctggcgacggtgcgcgacaag
ctgacgctcgcccctgccggctttgccgctttgctggccaaaatgcaggacagcgccggc
gccggtggcctgatcgcccgcgccgccaaccgccagctcggcaagtccgatcgcgaagcc
gctggcgtgctgtcctcggcacagcgccatacccactttctcgacagccctcgcatcgtc
gccagcaccgccgcgtcggatttcaccttcgcggggctgaaggacacgaccgccaccgtg
ttcctgtgcctgccgcccgatcggctcgacacctatgcgcgctggctgcggctgctggtg
agccaggccgtcaccgacatggcgcggtccaccgcccgtcctgcccggcccgtgctgttc
ctgctggacgagttcgccgcgctcggccgtctcgaaccggttgaacgcgcgatgggcctg
atggcgggctatggcctccagctctggccgatcctccaggacatgcaccagcttaaggcc
acctatggcgagcgcgccggcaccttcatgtccaacgccggcgtgatccagacgttcggg
gtcaacgatcatgccaccgccgacatgctctcgcgcacgatcggcgacaccacgatcgaa
tatgataccgtcagcacgtcgcgcggcaccggctggggcgaaaaccgcgctggtccctcg
gagagtgtcagcgggcacgtctccgctcgccggctcgccacaccggacgaaatcatgcga
atgcggcccgatcagcttctgctgctccgccagggcgaaaacccgctcgcggtcgagaaa
atccgctactacgatcaacgcgagttcactggcctgttcgatcctgcgtga
DBGET
integrated database retrieval system
