Sphingomonas aerolata: NEF64_18485
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Entry
NEF64_18485 CDS
T08450
Name
(GenBank) autotransporter outer membrane beta-barrel domain-containing protein
Organism
saer
Sphingomonas aerolata
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BigA_3rd
R06F6_12_middle
Motif
Other DBs
NCBI-ProteinID:
USR02292
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All DBs
Position
unnamed2:complement(join(73280..77112,1..3079))
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AA seq
2303 aa
AA seq
DB search
MIASEATVRPGSGAAAIISRASNASFDVNGLVDGGAGKAGLFVTTGMPFTTICTDPYAGA
SANYCVIGSTLTNYPSASAMVTVAAGGTVTGAQGILLQRDASNTNGYISASIDNAGTISG
TAGPAVVANQTGFGSLSVTNRATGTIGGIAGTVSYVTNAGTIDGGGNAALASTVSGMNVV
NTGRIVSSGSAATLSDTGSYLYVSNATGAVIGGSTTAIRTSGVLSLTNVGTINGSVVSTV
GSGTSSTIDTRQGVINGDLVLGAGNDTLRARYDAATGRIASITGTVDGGAGSDTLAFGVD
ADAVFTRAVLPTNFELFGFDLSNNAVATLAAGFTSGTGVSVSGTGALVNQAALVTNGQAV
IAAFSSYGLDFTNQGSITASLSGTGLFAVGTPATVTNSGTITANGGSGVQAYTTLTNSGV
ITATGTGAAVVYGTLANSGTIRSTAGIGATISGGGFSGSTNDGTIIGATTGVSLSSGRLV
NTGTITGGTTGVLLGYGTTLINAASGTITGGTAAVSGTGSSVAIVNAGQIAGTVNLVSPY
SFDSSNDVFVDAGGTVTGAIRLGGGDDMLVVDLVSTGTRPLAGAIGGVDAGAGYDTLRYR
VNADASAALALTGGFEGLAYELTDAAALTLTAATPFATTIGLTGNGSVTLNGTISATDRT
LIDTGILTVDQLTMGTAGPAQALTITNAGTLALTTTTQTNFYSTLAAIAAGTADVTNSGT
ITVANAAGRYYPAVAIRGGNSVTNSGTITLSGGGTAISGARDIVNSGTITDISGTDISGT
GAGAIGVTAFTTLANSGTIRVDGTAVQGSYYYSPVQITNSGTIESRKATAVTLGYGSVLT
NETTGTISGLTAIDLSSGGTIVNRGTIIGDVAATSPYAYSSAVYVADGGMVTGNVTFGSS
TDMFLQTGATTGVSGTIDGGAGFDIFGWSRNASDSIALDQRTGINFEADYVEALGTDTRV
TLTAANPVTNDLYLRGDGTIVNEATIDGAAWTYLPISTAGLAQTNGLAAFVNRGTISGGV
SGAVYAFTNSGTVGAESLVSNAVYQGVSSGTLSFDNSGAIASSGDYYTASLEGYGLDGLT
ATNSGTITGGLAISATTVLDQTAPVTIAVANSGTITSATGTALVISTGSDYYFGGPSAVT
LTNDGTVTASGEGGVAARLYMQGRFGSTVSSTYAIANTGTIEATGNGLTQTYQDWDGTRY
TYTIPAAGLLLDTGTNVTGTITNSGTIQATGTSAVALLVSGTALDLTNSGTIRGGTGSVL
ANGYPLDGTSLAGAIQSWAGADDRIVNTGAIFGSVDLGDGNDSIENRGRIEGNVALGAGD
DSFLQRADAVLVGAVDAGEGNDGLIIDATVGGAVNGDQFVNFERFTQVGSGNVAYSGTFR
FDTIGVSGGDVTVAAGQVLTSAGTVTITGGEAAEGVTNAGTIAGSVDLGAGDDRVVNTGT
IQGAVLLGAGNDRFVEGTGSSVAGGVDGGAGDDLYGVTLAGNRSGIGQRNNFERLSVEGN
GTLGLTLDQGFQSIALAGTGLNLALGGFVVGTVTGSDAAEALAVDGDVAMVSLGAGNDEL
ALGATRAGGLYMGGAGSDLLRFTANAPVTLAGTATGFERIALAGGALTVTGTLGTAGTAL
TFGDDAQSVTVAPGGTLAGTIDLGAGNDGFRLTAGGTLLGTVSGGAGTDTATLELAGDRT
LGADMLRDFEILNGEGSGTLTLTGAQTYERVNAATNLTIGSGASLTAPVVFGAADNRFTV
AGRFAGSVDGGAGTDAILVSGGSAAAPVAFGSIANVEAFGMTAGYATIAGDASLNSVDMA
GGRLVGLAGSTIRAAQIAVRSGATFGSAGSVIGNIAVAGTLSPGASPGTMTVTGNVSLAS
GSVSLFEITPTVADKLVINGGLSIASGSTLRIVAEGAIRPGTSYDLIVASGGINGSYTTI
DKSASLFGFVVQRADRIQLLGQFLGDPAFNPQVARSIDYANAAIQVQPATSTLFAALPAL
LTASGASNSQAFAQLTPEAYASATQMGVDQTLSLTDVARGPGFATTDREDVGLFTFAQGI
AQWHTLGADRDAGTAKARSSGYGFLGGIGIGNRDWSVGAFAGYLDSRQRITDLGAATSTD
GVVAGVHGRYTAGNIRIGASILYDGGDARTTRALPGASSATGRYGLHSWATDLSVGYALA
MANDWTLTPKVGVTYLRTTRDRVSEAGGPFALTVARDRHVTGFADAGVTFARSEASDAAF
RPYVGFGARTRIEGKRADAVAGYAGAPLTLTALGAPRARVTGTASAGVAYRLPSGVELFS
TVEAQTGQDDHRESIATGVRLRF
NT seq
6912 nt
NT seq
+upstream
nt +downstream
nt
gtgattgcaagcgaagcgaccgtgcgccccggcagtggcgctgccgcgatcatcagtcgg
gccagtaatgcgtccttcgacgtcaatggtctggtcgacggcggggcgggcaaggccggt
ctgttcgtaaccaccggcatgccgttcacgacgatatgtacggatccctatgcgggcgct
tcggccaattactgcgtcatcggctccaccctgaccaactatccgtcggccagtgcgatg
gtgacggttgcggcgggcggcacggtgacgggcgcgcaggggatcctgctccagcgcgat
gccagcaacaccaatggctatatctcggcctcgatcgataatgccgggacgatcagcggc
accgcaggccccgcggtggttgcgaaccagacgggctttggctcgctctcggtcaccaac
cgcgcgaccgggacgatcggcggtatcgccggcacggtctcctacgtcacgaacgccgga
acgatcgacggaggcggcaatgccgcgcttgcctcgacggtgtccgggatgaacgtcgtc
aacaccggccggatcgtgtcgagcggctcggccgcgacgctgagcgataccggcagctat
ctctacgtcagcaacgcgacaggcgcggtgatcggaggcagcacgaccgcgatccgcacc
agcggtgtgctgtcgctgaccaatgtgggcacgatcaacggatcggtggtctcgaccgtc
gggtcgggaacgagcagcacgatcgatacgcgccaaggcgtgatcaacggcgatctggtg
ctgggcgcgggcaacgacacgctccgcgcgcggtatgacgccgcgaccggccggatcgca
tcgatcaccggaacggtcgacggcggagcggggagcgatacgctggcgttcggcgtcgat
gccgatgcggtgttcacccgtgcggtgctgccgaccaatttcgagctgttcggcttcgac
ctgagcaacaatgcggtcgcgacgctggccgcgggcttcacgtctggtacgggtgtatcg
gtcagcggcacgggcgcgctcgtcaaccaggccgcgctggtgaccaacgggcaggccgtg
atcgcggcattctcgtcctatggtctcgacttcaccaaccaggggtcgatcaccgcatcg
ctcagcggcaccggcctgtttgccgtgggcacgccggcgacggtaaccaactcgggcacg
atcaccgccaatggcggctcgggcgtgcaggcctatacgacgctgaccaacagcggcgtg
ataacggcaacggggaccggcgctgcggtcgtctatggcacgctggccaatagcgggacg
attcgttcgaccgcgggcatcggcgcgacgatttccggcgggggtttcagcggatcaacc
aacgacgggacgatcatcggcgcgaccaccggcgtgtcgctgtcgagcggacgactggtc
aacacgggtacgataacaggcggtaccacgggcgttttgctgggatacggcacgacgctg
atcaacgccgcgtcgggcacgatcacgggcgggaccgcggcggtgagcggcaccggatcg
tccgtcgcaatcgtcaacgccggccagatcgccggtacggtgaacctcgtttcaccctac
agcttcgattcgagcaacgatgtgttcgtcgacgcgggcggcaccgtgaccggcgcgatc
cggctgggtggcggtgacgatatgctcgtcgtcgacctggtgagcacaggcacgcgaccg
ctggcgggggcgatcggcggggtcgatgcgggcgccggctatgatacgctgcgctaccgg
gtcaatgccgatgccagcgcggcgctggcactgaccggcgggttcgaggggctcgcctat
gagctgaccgacgccgcggcgctgacgctgaccgccgcgacgccgtttgccaccacgatc
gggctgaccggcaacggatcggtgacgctgaacgggacgatctcggcgaccgatcgcacg
ctgatcgataccgggatcctgacggtcgaccagctgaccatgggcaccgccggaccggca
caggcgctgacgatcaccaacgccggcacgctggcgctgaccacgaccacgcagaccaac
ttctattcgacgctggcggcgatcgccgcaggcaccgccgacgtcaccaacagcggcacg
atcaccgtcgccaatgcggccggccgctattatccggcagtcgcgatccgcggcgggaac
agtgttaccaacagcggcacgatcaccctgagcggaggcggcacggcgatcagcggtgcg
cgcgacatcgtcaattcgggcacgatcacggatatttccggcacggatatttccggcacc
ggtgcgggcgcaatcggcgtgacggccttcaccacactggccaacagcggcacgatccgg
gtcgacggtaccgccgtgcagggcagctattattatagccccgtgcagatcaccaacagc
ggcacgatcgagagccgcaaggcgaccgccgtcacgctgggctatggcagcgtactgacc
aacgagacgaccgggacgatcagcgggctgaccgcgatcgacctctcgagcggcgggacg
atcgtcaaccgcggcacgatcatcggcgatgtcgcggcgacgtcgccctacgcctattcg
agcgccgtctacgtcgcggatggcggcatggtcaccggcaacgtgaccttcgggtcgagc
accgacatgtttcttcagaccggcgctacgaccggggtgagcgggacgatcgatggcggc
gccggcttcgacatcttcggctggtcgcgcaacgccagcgacagcatcgcgctcgaccag
cggacggggatcaatttcgaagccgattacgtcgaggcgctcggcaccgacacccgcgtg
acgttgaccgcggcgaaccctgtcacaaatgacctgtacctccggggcgacggcacgatc
gtcaacgaggcgaccatcgatggcgccgcgtggacctatcttccgatcagcacggccggg
ctggcccagaccaacggactggccgcgttcgtcaaccggggcacgatctcgggtggcgtg
agcggcgcggtctacgccttcaccaatagcggcacggtcggcgcagaatcgcttgtgtcg
aacgcagtctaccagggcgtttcgtcgggaacattgtccttcgacaacagcggcgcgatc
gcctcgtcgggcgactattacaccgcaagcctggaaggctatggcctcgacggcctcacc
gcaaccaacagcggcacgatcacgggcggactcgcgatatcggccaccacggttctcgac
cagaccgcccccgtcacaatcgcggtcgccaatagcggcacgatcacgtccgccactggc
accgcgctagtgatctcgaccggcagcgattactatttcggcggcccgagcgcggtcacg
ctgaccaatgacggtaccgtcaccgccagcggagaaggcggcgttgccgcgcggctgtac
atgcagggcaggttcggctcgacggtgagctcgacctacgcgatcgccaataccggaacg
atcgaggcgaccggcaacggcctgacccagacctatcaggattgggacggcacgcgctac
acctataccattccggcggccggcctgctgttggataccgggaccaatgtgaccgggacg
atcaccaacagcgggacgatccaggcgaccggcacgtccgcagtcgcgctgctagtatcg
ggcaccgcgctcgacctgaccaacagcggcacgatccggggcggcaccggcagcgtgctg
gcgaacggctacccgcttgacggcaccagcctggccggtgcgatccagagctgggccggc
gccgacgaccggatcgtcaacaccggtgcgatcttcgggtcggtcgatctcggcgacggc
aacgacagcatcgagaaccgcggccggatcgagggcaacgtcgcgctcggcgcgggcgac
gacagcttcctccagcgcgcggatgcggtgctggtcggcgccgtcgatgcgggcgagggg
aatgacggcctgatcatcgatgcgaccgtgggtggcgcggtcaatggcgaccagttcgtc
aatttcgagcgcttcacacaggtgggcagcggcaatgtcgcctattcggggactttccgc
ttcgacacgatcggcgtgtcgggcggcgatgtgacggtcgcggccggacaggtcctcacc
agcgcaggcacggtgacgatcaccggcggagaggcggccgaaggcgtgaccaatgcgggc
acgatcgccggcagcgtcgacctgggcgcgggcgacgaccgcgtcgtcaacaccggcacg
atccagggcgccgtcctgctgggcgccggcaatgaccgcttcgtcgaaggcaccggcagc
agcgtcgcgggcggcgttgatggcggcgcgggcgacgacctgtatggtgtcacgcttgcc
ggcaaccgcagcggcatcggccagcgcaacaacttcgagcgcctgagcgtcgagggcaat
ggtacgttgggcctgacactcgatcagggcttccagtcgatcgcactcgccggcaccggc
ctcaacctcgcgctgggtggcttcgtcgtcggcaccgtgacgggctcagacgcggccgag
gcgctggcggtcgacggcgatgtcgccatggtctcgcttggcgccggcaacgacgaactg
gcgctcggcgcgacgcgtgcaggcgggctttacatgggcggggcaggctccgacctgttg
cgcttcaccgcgaacgcaccggtcaccctggcgggcacggcaaccggcttcgagcgcatc
gcgcttgcaggtggcgcgctgaccgtgacgggaacgctcgggaccgccggcactgcgctg
acgttcggcgacgatgcgcagagcgtcaccgtcgcaccggggggcacgctggccggaacg
atcgatctcggtgcgggcaatgacggcttccgcctgacggcaggcggtacgctgctcggc
accgtctcgggtggagccgggaccgacacggcgacgctcgaactggcgggcgaccgtacg
ctcggcgccgacatgctgcgcgacttcgagatcctgaacggcgaaggcagtggcacgctg
acgctgacgggcgctcagacctatgagcgcgtcaatgctgcgaccaacctgacgatcggc
tcgggggcgtcgctcacggctccggtcgtgttcggggcagccgataaccgcttcacggtc
gcgggcaggttcgcaggctcggtcgatggcggggctggtacggacgcgatcctggtatcg
ggcggcagcgccgcggcaccggtcgcattcggctcgatcgcgaatgtcgaggcgttcggg
atgaccgcaggctatgcgacgatcgccggcgatgcctcgctgaatagtgtcgacatggcg
ggtggtcgacttgtcggcctggccggatcgacgatccgcgcggcgcagatcgcggtacgc
tcgggcgcgaccttcgggtcggccgggtcggtgatcggcaatatcgcggtcgccggcacg
ctcagccctggggcttcgccgggtacgatgacggtgacgggcaacgtctcgcttgcgagc
ggatcggtgtcgctgttcgagatcacgccgaccgtggccgacaagctcgtgatcaacggt
gggctttcgatcgcgtcggggtcgacgctccgcatcgtcgcggaaggtgcgatccggccg
ggcacgtcctacgacctgatcgtcgcaagcggcgggatcaacggtagctatacgacgatc
gacaagtcggcgtcgttgttcggcttcgtcgtgcagcgtgccgaccggatccagctgctc
ggccagttcctcggcgatcccgcgttcaacccgcaggtcgcgcgcagcatcgactatgcc
aatgccgcgatccaggtgcagccggcgaccagtacgctgtttgccgccttgcccgcactg
ctgacggcgagcggcgcatcgaacagccaggcgttcgcgcaattgacgcccgaagcctat
gcctcggcgacgcagatgggcgtcgaccagacgctgagcctgaccgacgtcgcacgcgga
ccgggctttgcgaccaccgaccgcgaggacgtcggcctcttcaccttcgcgcaagggatt
gcgcagtggcacacgctcggcgccgatcgcgacgcgggtaccgcgaaggcccgcagcagc
ggttacggcttcctcggcgggatcggcatcggcaaccgtgactggtcggtcggcgcattt
gcgggctatctcgacagccgccagcggatcactgaccttggcgccgcgaccagcaccgat
ggtgtcgtcgcaggcgtccacggccgctacacggcaggcaatatccggatcggcgcgtcg
atcctgtatgatggcggcgatgcccgtaccacgcgcgcactgccgggggcgagcagcgca
accgggcgctatggtctacacagctgggcgaccgacctgtcggtcggctatgcgctagcc
atggcgaatgactggacgctgacccccaaggtcggcgtgacctatctgcgcactacccga
gaccgggtgagcgaggccggcgggccgttcgccttgaccgtggcgcgcgaccgccatgtc
acgggctttgccgatgccggcgtgacgttcgcgcgcagcgaagcgtccgacgccgcgttc
cgtccctatgtcgggttcggcgcccgcacccggatcgaagggaagcgggccgatgcggtc
gcaggctatgccggtgcaccgctgacgctgaccgcgctgggcgccccgcgcgcacgggtg
accggtacggcatcggccggcgtcgcataccgcctgccgagcggcgtcgagctgttctcg
acggttgaagcgcagactggccaggacgaccaccgcgagagcatcgcaacgggcgtgcgg
ctgcggttctga
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