Sphingomonas aerolata: NEF64_18655
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Entry
NEF64_18655 CDS
T08450
Name
(GenBank) type IV secretory system conjugative DNA transfer family protein
Organism
saer
Sphingomonas aerolata
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
USR02267
LinkDB
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Position
unnamed2:complement(47028..48671)
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AA seq
547 aa
AA seq
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MGLARATRNLARTARANPMWALLGILLAPFRFARHIIGVVLFTMVLFVALFLLLMLAIWY
FGLDKNGAVAQFGVFGISGAVVLIMVWMFVLPLLRRFDYSDSADTHGSARFATAGEAQAL
NDDHGLLIGRDVKTGKQMRYAGPAHLLTIAPTRTGKGVGTIIPNLLEYPFAVVCIDPKGE
NARIAARQRGKFGAVHVLDPFGVTGLASAAFNPLDRIDPHGLDLADDCMTLADALVHDAP
GEAGDAHWNEEAKALIAGILLHIVTTEPPAIRTLDTLRDRLTLAPATLAAQLAAMQAQGG
LVGRAANRQLGKSDREAAGVLSAAQRHTHFLDSPRMGTVLGSSDFTFAGLKDAPATVFLV
LPPDRLASYARWLRLMVAQALTELARAPGRPPWPVLFLLDEFAALGRLEPVERAMGLMAG
YGVQLWPILQDVHQLRALYGQRAGTFLSNAGVLQVFGVNDQDSAKLISDLAGQETVVFET
MSRAIDTEESGLSFGQQHVGRALLTPDEVRTLRPDRQLLFLAGQRPIIAAKLRYYADREF
AGRFDPA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggccttgcgcgcgccacccgtaatctcgcccgcaccgcccgtgccaatccgatgtgg
gccttactcggcatcctgctcgcccctttccggttcgcccggcacattatcggcgtggtc
ctgttcacgatggtgctgttcgtggcgctattcctcctgctgatgctggcgatctggtac
ttcggcctcgataagaacggcgctgtcgctcagtttggcgtgttcgggatcagcggtgcc
gtagtgctgatcatggtctggatgtttgtcctgcccctgcttcgtcggttcgactatagt
gacagcgccgacacgcatggttcggcccgctttgccacagccggggaagcccaggcgctc
aacgacgatcacggcctgctgatcggtcgcgacgtgaagaccggcaagcagatgcgctat
gccggtcccgcccatctgctgacgatcgcccctacccgcaccggcaagggtgtcggcacg
atcatccccaacctgctcgaatatccgttcgcggtcgtctgcatcgaccctaaaggcgag
aacgcccgcatcgccgcgcgccagcgcggcaagttcggcgccgtccatgtccttgatccg
ttcggcgtcaccggcttggcctcggcggcgttcaatccgctcgatcgcatcgacccgcac
ggcctcgatctcgccgacgattgcatgaccctagccgatgcgctggtccacgacgcaccc
ggcgaggccggcgacgcgcattggaacgaggaagccaaggcgctgatcgccggcatcctg
ctccacatcgtcaccaccgaacctcccgccattcgcaccctggacacactgcgtgaccgg
ctgacgctcgccccggctacattggcggcgcagctcgccgctatgcaggcgcaagggggg
ctggtcgggcgagccgccaaccgccagcttggcaaatccgaccgcgaagcggccggcgtg
ctgtcggccgcgcagcgccatacccactttctcgactccccgcgcatggggacggtgctg
ggcagctcggatttcacgttcgccgggttgaaggatgcgccagcgacggtgttcctcgtg
ctgccgcccgatcggctcgccagctatgctcgctggctgcgcttgatggtcgcgcaagcc
ctgaccgagctggcgcgcgcaccgggtcgcccgccttggccagtgctgttcctgcttgac
gagttcgcggcgctcggccggcttgaaccggtcgaacgcgcgatggggcttatggcgggc
tatggcgtccagctctggccgatcctccaagacgtccaccagctccgcgcgctctacggg
cagcgcgccggcacttttctatcgaacgccggcgtcctccaggtgttcggggtcaatgat
caggacagcgccaagctcatctccgatctggccgggcaggaaaccgtcgtgttcgagacg
atgagtcgcgcgatcgacacggaggaaagcggcctctcgttcgggcaacagcatgtcggc
cgcgccctgctcacccccgatgaagtccgcacactccgccccgatcgccaactcctgttc
ctcgccgggcagcggccgatcatcgccgccaagctgcgctactatgctgatcgcgagttc
gccggccggtttgatccggcgtaa
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