Sphingomonas aerolata: NEF64_18805
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Entry
NEF64_18805 CDS
T08450
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
saer
Sphingomonas aerolata
Pathway
saer03030
DNA replication
saer03430
Mismatch repair
saer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEF64_18805
03430 Mismatch repair
NEF64_18805
03440 Homologous recombination
NEF64_18805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saer03032
]
NEF64_18805
03400 DNA repair and recombination proteins [BR:
saer03400
]
NEF64_18805
Enzymes [BR:
saer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEF64_18805
DNA replication proteins [BR:
saer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEF64_18805
DNA repair and recombination proteins [BR:
saer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEF64_18805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
SmaI
Motif
Other DBs
NCBI-ProteinID:
USR02363
LinkDB
All DBs
Position
unnamed3:208..1098
Genome browser
AA seq
296 aa
AA seq
DB search
MIDDPESVVRELEASGKYRVLRRLDLPRQLAENLGTPTKCGIFLDIESTGLNPVLNEPIE
FAMVPFEYTTDGRVVAVREPLHQFNEPTEAIPSEITAITGLTDAHVAGHKLDVSAIEMFA
AQAAIIIAHNAAFDRPFAERISPVFAAKPWACTMCDVPWKEEGIEGRRLSDLLSRFSYFF
DAHRAVDDCNAGIALTTMTLPVSGRTVLDRLLEVARQPTWRIFAEGAPFETKEVLKQRGY
RWNTDAAVGPRAWRIDVNEARVETEIAFLKTEILGSRSIPSVSEITAFQRYSARNR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgatcctgaaagcgtcgtgcgagagcttgaggcgagcggcaaataccgtgtg
ctccgcaggctcgatctgcctcggcagcttgcggagaacctcggcactccaaccaagtgc
ggcatcttcctcgacatcgagagcacaggtctgaaccccgtgctgaacgaaccgatcgag
ttcgcgatggtgccattcgaatatacaacggatggcagggtggtcgccgttcgcgaacca
cttcatcagttcaacgaaccaacggaagccatcccttcagagataaccgccataaccgga
ctcacggacgcccacgttgcgggtcacaaactcgatgtctccgccatcgagatgttcgcc
gcgcaggccgcgatcataatcgcgcacaacgccgctttcgatcgcccattcgcggaacgg
atctcgccagtgttcgccgcaaagccgtgggcgtgcacgatgtgcgacgtaccatggaaa
gaggaaggcatcgaaggccgtcgattgtcggatctgctctcgagattttcatatttcttc
gacgcgcatcgcgccgtcgacgactgcaatgcaggcattgcgctgaccaccatgacattg
cccgtcagcggtcgaacggttctcgacaggcttctggaggtggcgcgtcagccaacctgg
cgaatttttgcagaaggggcgccgtttgagacaaaggaggttctcaaacagcgcggttac
cgatggaacacggacgctgccgttggcccgcgcgcgtggcgcatcgacgtcaacgaagcc
agagttgaaaccgaaatcgcgttcctcaagacggagatcctgggttcgcgatcgatcccg
tccgtgagcgagataaccgccttccaaagatattcggcaaggaacagatga
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