Shewanella aestuarii: HBH39_00065
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Entry
HBH39_00065 CDS
T06921
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
saes
Shewanella aestuarii
Pathway
saes00071
Fatty acid degradation
saes00280
Valine, leucine and isoleucine degradation
saes00310
Lysine degradation
saes00362
Benzoate degradation
saes00380
Tryptophan metabolism
saes00410
beta-Alanine metabolism
saes00640
Propanoate metabolism
saes00650
Butanoate metabolism
saes00907
Pinene, camphor and geraniol degradation
saes00930
Caprolactam degradation
saes01100
Metabolic pathways
saes01110
Biosynthesis of secondary metabolites
saes01120
Microbial metabolism in diverse environments
saes01200
Carbon metabolism
saes01212
Fatty acid metabolism
Module
saes_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HBH39_00065 (fadB)
00650 Butanoate metabolism
HBH39_00065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HBH39_00065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HBH39_00065 (fadB)
00310 Lysine degradation
HBH39_00065 (fadB)
00380 Tryptophan metabolism
HBH39_00065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HBH39_00065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HBH39_00065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HBH39_00065 (fadB)
00930 Caprolactam degradation
HBH39_00065 (fadB)
Enzymes [BR:
saes01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HBH39_00065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HBH39_00065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HBH39_00065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HBH39_00065 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
QIR13081
UniProt:
A0A6G9QGQ1
LinkDB
All DBs
Position
PN3F2:complement(16686..18836)
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AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFDAPGSVNKFDRETLASLDAALDSIKQHSDIKALLLTSA
KSTFIVGADITEFLDLFKQDDATLLAWVNQANSVFNKLEDLPFPTASAINGFALGGGCET
ILATDLRIADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNAVEWITTGKEQRPDDALK
VGAIDAVVAPENLQATAIQMLKDALAGNLDWQARRTQKQSPLQLGKLEAMMSFTTAKGMV
YAVAGKHYPAPMAAVSVVEQAATMDRTGALQVEAQAFIKLAKTDVATALIGIFLNDQFVK
GKAKKAVKLANDVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKLL
SAQVARGRSTPEKMAKVLNNITPSLDYTAIKHSDVVVEAVVEHPKVKATVLAEVEDYVSK
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGEHSSEETIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKTDKDAIDIMFENNRLGQKNTKGFYSYSVDRRGKP
KKDIDPTSYELLKGTFGELKAFEADDIIARCMIPMIIETVRCLEEGIVASPAEADMGLVY
GLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccattcaggttgagttactagaagacaatattgccaagctg
tgctttgatgcaccgggctcggttaacaagttcgatagagaaactctagcctcattagat
gctgcactagacagcatcaaacaacattcagatatcaaagcattattactgacctctgca
aaaagtacatttattgtaggtgctgatatcacagaatttttagatcttttcaaacaagat
gacgccacgcttcttgcttgggttaaccaagctaacagcgttttcaataaacttgaagat
ttaccctttccgactgcatcagccattaacggttttgcactaggtggtggctgtgaaacc
atcttggcaacggatttacgtattgcagacaccaatgctcgcattggcttacctgaaacc
aaactcggattaattcctggttttggtggcacagttcgcttacctcgcgttatcggtgcc
gataatgccgtagaatggattaccacaggcaaagaacagcgcccagatgacgccttaaaa
gtcggcgcaattgatgctgttgttgcacctgaaaacttacaagcaacagcgattcaaatg
ctaaaagatgccctagcgggtaacttagattggcaagcacgtcgtacgcaaaaacaatct
ccattacaacttggcaaacttgaagccatgatgtcattcaccacggcaaaaggcatggtt
tatgccgttgccggtaaacactatccagcaccaatggctgcagtgagtgtggttgaacag
gctgcgaccatggatcgcacaggagcactacaagttgaagctcaagcatttattaagcta
gctaaaactgacgtagcaacggccttaattggtattttcttaaatgaccaatttgtgaaa
ggcaaagctaaaaaagcggttaagttagcaaatgatgtgaacaatgcagcggtattaggt
gcgggcattatgggcggtggtattgcataccaaagcgctagtaaaggcaccccaatagtg
atgaaagacatcgctcaacctgcactagagttaggtctaaatgaagccgctaaattgctt
tcagctcaggtagcccgcgggcgttcaacacctgaaaaaatggcaaaagtgctaaacaac
attaccccatcattagattacactgcgattaagcatagtgacgtagttgttgaagccgtt
gttgagcatccaaaagtaaaagcaacggtattagcagaagtagaagactatgtgtcaaaa
gatgccatcattgcctctaatacttcaaccatttcaatcaacctattagctaaaagtctt
aaaaagcctgagcgcttctgcggtatgcacttctttaatcccgtgcataaaatgccatta
gttgaagtcattcgtggtgagcacagctcagaagaaaccatcgcatcagtagtggcttac
gccagcaaaatgggcaaaaccccaatcgttgttaatgactgcccaggcttctttgttaac
cgcgtattgttcccatactttgcaggctttaacggtttattggctgacggcgcagacttt
gctgcggtagataaagtcatggaaaaacaatttggctggccaatgggccctgcttatctg
cttgatgtggttggtttagatactggccatcacgcacaagcagtaatggctgaaggattc
cctgatcgcatgggcaaaacagacaaagatgctattgatatcatgtttgaaaacaatcgc
ttaggacaaaagaatactaaaggtttctattcttactctgttgaccgccgcggtaagccg
aaaaaagatatcgacccaactagctatgaattactcaaaggcacatttggcgaacttaaa
gcatttgaagctgatgacatcatcgcacgttgtatgatcccaatgatcatcgaaactgtt
cgttgtttagaagaaggtattgtcgcttctccagcagaagccgatatgggcttggtgtat
ggtttaggattccctccattccgcggtggtgtattccgttatttagacactatgggcgta
gcaaactttgttgccctagctgataaatatgcgcatttaggtggcttataccaagtgact
gatgcaatgcgtgaacttgcagccaacaacggtagttactaccaagcctaa
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