Shewanella aestuarii: HBH39_00110
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Entry
HBH39_00110 CDS
T06921
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saes03009
]
HBH39_00110 (rsmB)
Enzymes [BR:
saes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
HBH39_00110 (rsmB)
Ribosome biogenesis [BR:
saes03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HBH39_00110 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_37
FtsJ
Methyltransf_11
Methyltransf_5
Methyltransf_12
MTS
Methyltransf_15
Cons_hypoth95
BMT5-like
TrkA_N
Methyltransf_36
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QIR13089
UniProt:
A0A6G9QGS5
LinkDB
All DBs
Position
PN3F2:complement(27027..28310)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLRALAAKAIFDVLEKGMSLSVALPEQQQHAVSSKDKALMAEICYGVMRQLPQLDKCIS
DCLTKPFKGKQRILHQLLLVGCYQLYFTRIPAHAAISETAEACRQLRFDGLVKVVNGVLR
NIQRSEKPLNTDSDTLRYNTPAWFIKRLQQAYPKDWQQIIEQSHQRPPMWLRNNQLSQTR
DSYLALLAEQQINAKAGNSPNAILLDSAKDVAALPGFMQGTASVQDGAAQWAATLLAPQN
GELILDACAAPGGKTCHIIEQAPLAEVVAVDFDEKRLARVQQNLDRLNLKAQVIHGDAAN
IDAWWQGAKFDRILLDAPCSATGVIRRHPDIKWLRKNNDIAELAQLQRQIFDHCWQWLKP
GGTLLYATCSILPEENRQQIEAFLARTPDAQLVPISQQMNEQDIGWQILPGQDNMDGFYY
ARLVKAQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcgcgcattggccgctaaagccatttttgatgtattagaaaaaggaatgtca
ctgtcagtggcactacctgagcaacagcaacatgctgtaagcagtaaagataaagcatta
atggctgagatttgttatggcgtgatgcgtcaactgcctcaattagacaaatgtatcagt
gattgtctaacaaaaccttttaaaggcaaacaacgtattttgcatcaattgctattagtt
ggttgttaccagttgtactttactcgtattcccgcccacgcagcaatatcagaaaccgct
gaagcctgtcgtcaattaaggtttgatggcttagttaaagtcgttaatggtgtgctacgc
aatattcagcgcagtgaaaaaccgttaaacactgattcagatacccttcgctataacaca
cctgcttggtttattaagcgattacaacaagcctatccgaaagattggcaacagattatc
gaacaaagccaccagcgtccccccatgtggctgcgcaacaatcagttgtcgcaaactcga
gatagctaccttgctcttttggcagaacaacaaattaacgccaaagcaggaaacagccct
aatgctattttacttgatagcgccaaagatgttgctgcacttcccggctttatgcagggc
acagcctcagttcaagatggcgcagcacaatgggcagcaaccttgttagctccccaaaat
ggtgagttgatattagatgcttgcgctgcacccggcggcaaaacatgccacatcatagag
caagcaccacttgctgaagtcgtcgccgttgattttgatgaaaaacgcttagctcgggtg
caacaaaacctcgacagattaaatttaaaagcgcaagttattcatggtgatgcggccaat
attgatgcttggtggcaaggtgctaaatttgatcgtattttgcttgatgccccctgttca
gcgacaggagttattcgtcgtcaccctgatattaaatggctgcgtaaaaacaacgacatt
gcagagttagcacaattacagcgacaaatattcgatcattgttggcaatggctaaagcca
ggtggaaccttgctttatgccacgtgttcaattttacccgaagaaaatcgacagcaaatc
gaggcctttttagcacgaacacctgatgcgcaacttgtgccaatcagtcaacaaatgaac
gagcaagatattggctggcaaatattgccagggcaagacaatatggacggtttttattac
gctcgcttagttaaagcacagtaa
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