Shewanella aestuarii: HBH39_01140
Help
Entry
HBH39_01140 CDS
T06921
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saes03021
]
HBH39_01140 (rpoH)
Transcription machinery [BR:
saes03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HBH39_01140 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Fe_dep_repress
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
QIR13260
UniProt:
A0A6G9QFG5
LinkDB
All DBs
Position
PN3F2:223458..224318
Genome browser
AA seq
286 aa
AA seq
DB search
MTYQTQSMALALPQSSGSIEAYIQSVSNIEMLDAQTEYDLAKRLQETGDLQAAKQLIMSH
LRFVAHVAKGYSGYGLPQADLIQEGNVGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKAKKRLGWFSDEEVSMVAENLGVSKADVTEMESRMAA
QDPGFDLASDSDDDTTDYAPALYLEDHSSDVAQQVEDDNWESDSQNRLLSAIKTLDERSQ
HILRARWLDDDKTTLQELASTYQVSAERIRQLEKNAMNKLKACMEI
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaaacgcaatcaatggcgctagcgttaccacaaagcagtggtagcatagaa
gcttatatccaatcagtttctaacattgaaatgttagatgcacagactgagtatgacctt
gccaagcgtttacaagaaactggcgatctgcaagccgctaagcaactcattatgtcgcat
ctacgttttgtggcacatgtagcgaaaggctattcgggctacggtttaccacaagctgat
ttaattcaagaaggcaatgttggcttgatgaaagcggttaaacgctttgatcccgatgtt
ggggttcgcctcgtatcatttgcggtgcactggattaaagccgaaattcatgaatacgta
ctgaaaaactggcgcattgtcaaagtcgcaaccactaaagctcaacgtaaattgtttttc
aatatccgcaaggcgaaaaagcgtttaggttggtttagtgatgaagaagtatcaatggtt
gctgaaaacctaggtgtttctaaagccgatgtgaccgaaatggaatcacgcatggcagcc
caagatcccggatttgatcttgctagcgacagtgatgatgacaccacggattacgcaccg
gcattgtatttagaggaccattcatcagatgttgcacagcaagtagaagatgataattgg
gaatcagactcgcaaaatcgtttattatcagccatcaaaactttagacgagcgcagtcag
catattcttcgcgcccgttggttagatgatgataaaaccacattgcaagaattagcctca
acctatcaagtatctgctgaacgcatcagacagttagaaaaaaatgctatgaacaagctt
aaagcttgtatggaaatctaa
DBGET
integrated database retrieval system
