Shewanella aestuarii: HBH39_01170
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Entry
HBH39_01170 CDS
T06921
Symbol
slmA
Name
(GenBank) nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
saes03000
]
HBH39_01170 (slmA)
03036 Chromosome and associated proteins [BR:
saes03036
]
HBH39_01170 (slmA)
Transcription factors [BR:
saes03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HBH39_01170 (slmA)
Chromosome and associated proteins [BR:
saes03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
HBH39_01170 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_AsnC-type
bpX0
HTH_20
DUF6262
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QIR13266
UniProt:
A0A6G9QFM3
LinkDB
All DBs
Position
PN3F2:complement(229858..230451)
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AA seq
197 aa
AA seq
DB search
MAESPKINRREHILQCLAQMLETSPGQRITTAKLAAEVGVSEAALYRHFPSKARMFEGLI
EFIEDAILSRLNIIMDEEKDTMKRCQLVLQLLLVFSERNPGISRVLNGDALLGENERLRS
RISALFAKIETQIKQILREKTIREGHGFNLDEAILANLLLAFAEGRISQFVRSEFKQKPT
QHFDEQWTFIQQQLLRS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaagcccaaagatcaatcgtcgtgaacatattctgcaatgtttagctcaaatg
ttagaaaccagcccaggacaaaggatcaccacagccaaattggcagcagaagtcggtgtc
tctgaagcggcgctgtatcgccacttccccagtaaagcaagaatgtttgaaggcttaatt
gaatttatcgaagatgcgattttatcgcgtctaaatatcatcatggatgaagaaaaagac
acaatgaaacgctgtcagcttgttttacagctgctgctggttttttcagaacgtaaccca
ggtatttcaagagtcttaaacggtgatgcgttattaggagagaatgaacgcctacgcagc
cgaatcagtgctttatttgccaaaattgaaactcaaatcaaacaaatcttacgtgaaaaa
accattagagaaggacatgggtttaacttagatgaggccatcttagcgaatctattatta
gcctttgccgaaggcagaatttctcagtttgttcgcagtgagttcaaacaaaaacccacc
caacactttgatgagcagtggacatttattcagcagcaactgctgagaagttaa
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