Shewanella aestuarii: HBH39_02390
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Entry
HBH39_02390 CDS
T06921
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
saes
Shewanella aestuarii
Pathway
saes03420
Nucleotide excision repair
saes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBH39_02390 (uvrD)
03430 Mismatch repair
HBH39_02390 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_02390 (uvrD)
Enzymes [BR:
saes01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HBH39_02390 (uvrD)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBH39_02390 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HBH39_02390 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
DUF4391
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QIR13491
UniProt:
A0A6G9QHW9
LinkDB
All DBs
Position
PN3F2:507373..509556
Genome browser
AA seq
727 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPLSNMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVVGSNMGRMWIGTFHGLAHRILRTHFQDANLPQSFQIIDSDDQL
RLLKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPIEQNLLNIYKIYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFRHILVDEFQDTNAIQYAWIRVLAGNT
ANVMIVGDDDQSIYGWRGAQIENLHRFLKDFPGAETIRLEQNYRSTANILNASNELIANN
PDRLGKKLWTEDKDGEPISVYCAFNEMDEAKFIVGRINDWHDKGGSLSDCAILYRSNAQS
RVLEEALLHRGIAYRIYGGLRFFERQEIKDAMGYMRLINNKDDDAAFERVVNTPTRGIGD
RTLEIIRSTARQHQLTLWQASLRLLDEKVLAGRAANAVRGFMDLIINMRTDTADMLLYRM
TDSVINTSGLRSMYEAEKGEKAQARIENLNELVTAARSFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAGVEEGLFPSKMALDEGDRLDEERRLCY
VGMTRAMQKLYISYAESRRIYGREDYASPSRFINEIPEKYVEQIRLRAQVSPSISQRYPA
RGSTSGFKDSAPNSTGFSVGQRVKHFKFNEGVVTNFEGTGEKARIQVNFSDFGSKWLLVS
LAKLEAC
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcatcattattagacggcctaaatgacaagcagcgtgaagccgtaggcgca
cctttatccaatatgttggtgctcgccggtgccggtagcggaaaaacgcgggtgctaact
caccgaattgcttggttaatgcaggttgagcagcaaagtccatattccatcttagcggtt
acttttaccaacaaagccgcagctgaaatgcgcgagcgagttgaaaaagtggttggcagc
aacatggggcgcatgtggataggtactttccacggtttagcccatcgtattttacgcact
cattttcaagatgctaacttaccgcaaagcttccaaattattgattctgatgatcagcta
aggctattaaagcgaattttgaaaagccttaacttggatgaaaagcaatacccaccgcgt
caagctcaggggtatattaatggtaaaaaagatcaaggtttacgcccaaaacatattgat
gctggtgggtttcctattgaacagaatttattaaacatttacaaaatttaccaagagtcg
tgcgatcgcgcagggttggtggattttgccgaaattctgttacgtgcccatgagctgtgg
ctcaataaaccacatttgcttgcccattaccaagagcgttttcgtcatattttggtggat
gagttccaagatacgaacgcgattcaatatgcatggatcagagtgttagcaggcaatacc
gctaacgtgatgattgtgggtgacgatgaccaatctatctacggctggcgcggggcgcaa
attgaaaacttgcatcgttttttaaaagatttccctggtgcagaaacaattcgccttgag
caaaactaccgctcaacagccaatattttgaatgcctcaaacgaactgatcgccaacaat
cctgatcgattaggcaaaaagctatggactgaagataaagacggcgagccgatttcagtt
tattgcgcctttaatgaaatggatgaagctaagtttattgttggccgaattaatgattgg
cacgacaagggcggtagtcttagtgattgtgctattttgtatcgctcaaatgctcagtcg
cgggtattagaagaagccttattgcatcggggtatcgcctatcgaatttatggtggatta
cgcttcttcgaacgccaagaaattaaagatgccatgggatatatgcgtcttatcaacaat
aaagatgacgatgccgcctttgagcgagtggtgaatacgcctacccgtggcattggcgat
cgcaccttagaaattatccgctcgacagccagacagcatcaattaaccctatggcaagct
agtttacgtttattagatgaaaaagtacttgctggccgtgcagctaatgctgtgcgcggt
tttatggatttaatcatcaatatgcgtaccgataccgcagatatgctgctatatcgtatg
actgatagcgtgataaatacctctggtctgcgctccatgtacgaagccgaaaaaggcgag
aaagcccaagcacgtattgaaaacttaaacgagttagtgactgctgcgcgtagttttgaa
atgcccgaagagcttgaagatatgggcgagctaaacgcctttttatctcatgcagcatta
gaagcgggcgaaggccaagccgatgcctttaccgatgcggtgcaattgatgacgttgcat
tcagccaaaggacttgagtttccaatggtgtttatggctggagtagaagaagggttattc
ccaagcaaaatggccttagatgaaggcgatcgcttagatgaagaacgtcgtctttgttat
gttggcatgacccgcgcaatgcaaaaactgtatatcagttatgctgaatcacgccgtatt
tatggccgagaagattacgctagtccgtcgcgttttattaatgaaattcctgagaaatac
gtcgagcaaattcgtttgcgggcacaagtttccccctcaattagtcaacgctatcctgcc
cgcggttccacttcaggctttaaagatagtgcgcctaacagtacaggttttagtgttggc
caacgggttaagcattttaagtttaatgaaggtgtggtgacaaactttgaaggtacgggt
gaaaaggctcgcattcaggtgaatttcagcgactttggcagtaaatggctgctggtgagt
ttagcaaaactggaagcctgttaa
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