KEGG   Shewanella aestuarii: HBH39_02470
Entry
HBH39_02470       CDS       T06921                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
saes  Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:saes00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:saes03019]
    HBH39_02470 (rapZ)
Messenger RNA biogenesis [BR:saes03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HBH39_02470 (rapZ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C Integrase_1 AAA_16 AAA_18 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: QIR13505
UniProt: A0A6G9QHF7
LinkDB
Position
PN3F2:complement(524031..524888)
AA seq 285 aa
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPVAMIGTLLEQLKASSDLVAISVDVRNI
AEQGKVLQAQLALLGNDIEVTSFFLNSSDKVLLKRYSETRRLHPLSKNQISLQDAIKLEG
KLLEPIASVVDHYIDTSALNIYDLSDQVREILMGSVDKDLVINIESFGFKHGMPTEADFM
FDVRFLPNPHWEVELRPFTGLEQPVQDFLGKQPLVNKFIMQIENLFETWMPHLERNNRSY
LTIAIGCTGGQHRSVYIADQLSKRFASSTKHVVHARHRELDNKHK
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaaattagtcatagtatcaggacgttctggctcaggaaaatccgttgcacttagggtg
ctggaggaccttggttattattgtgttgataatttacctgtggcaatgattggcaccttg
cttgaacaattaaaagccagcagtgatttagtcgccatcagtgttgatgtcagaaacatt
gcagaacaaggtaaagtactacaagcgcaactggcactacttggtaatgatattgaagtc
actagcttttttctgaactcatcagataaagtgctacttaaacgctacagcgaaacccgt
cggttacaccctctctctaaaaatcaaatttcacttcaagatgcgataaagctagaaggc
aaactgttagagccgatagcgagtgttgttgatcattacattgatacctctgcgctcaat
atttacgatcttagcgaccaagttcgtgaaattttaatgggtagtgttgataaagactta
gtgatcaacattgaatcatttggctttaaacatggcatgccaacagaagcagactttatg
tttgatgtgcgctttttaccaaacccacattgggaagttgaattaagaccttttacaggc
cttgagcaacctgtacaagactttttaggtaagcagccactggttaataaattcattatg
caaattgaaaatttgtttgaaacatggatgccacacctagagcgtaataatcgtagctat
ttaaccatcgcaattggttgtactggtggacaacatcgctcagtttatattgcggatcaa
ctcagtaaacgatttgcatccagcaccaagcatgttgttcacgcaaggcaccgcgagctt
gataacaaacacaaataa

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