Shewanella aestuarii: HBH39_03385
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Entry
HBH39_03385 CDS
T06921
Name
(GenBank) L,D-transpeptidase family protein
KO
K19235
L,D-transpeptidase YbiS
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
saes01002
]
HBH39_03385
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
saes01011
]
HBH39_03385
Peptidases and inhibitors [BR:
saes01002
]
Cysteine peptidases
Family C82
HBH39_03385
Peptidoglycan biosynthesis and degradation proteins [BR:
saes01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HBH39_03385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
QIR13665
UniProt:
A0A6G9QHW7
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All DBs
Position
PN3F2:complement(733361..734278)
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AA seq
305 aa
AA seq
DB search
MLNLVKTIFIAATAAVISLNSFAIEYRLPAKGNRLVGENQYYVVPEGKLTLEDIAAQFQL
GLTNLLEANPGVDPFLPKPGSTLVIPHQLILPDTKREGIVINSAEMRLYYYPKGKNIVEV
LPIGIGQIGKDTPENWVTKVQRKRANPTWTPTARMRKEYAANGIILPDVWPAGPDNPMGL
FALYVGNLYAIHGTNATFGIGLRVSQGCVRLRNEDIEHLFSSVPVGTRVEFINQPIKATE
ELDGNRYLEVHQPLSRTQDEFESNEPVSLTLDKTITRFLAHPDTDSFVLKRLLEQRNGIP
TRINP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatcttgtaaaaaccatttttatagctgcaactgctgcggtgataagcttgaat
agctttgctatcgagtaccgtttgccagcaaaaggcaatcgcctcgttggtgaaaaccaa
tattatgttgtaccggaagggaaactcacgcttgaagatattgcggcgcaatttcaactt
gggttaactaacttacttgaagccaaccctggggtagacccttttttacctaaacctggc
agcacgctggtgatccctcaccaactgattttacctgacactaagcgtgaagggattgtc
atcaactcagccgaaatgcgactgtattattatcctaagggtaaaaacattgtcgaagtg
ttacctattggtataggacaaattggcaaagacacccctgaaaactgggtcaccaaagtg
caacgtaaacgcgcaaatcccacttggactccaaccgcccgtatgcgtaaagaatacgct
gccaatggcattatattacctgacgtatggccagcgggtcctgataacccaatgggttta
tttgcgctatatgtaggtaatttatatgcgattcatggcaccaatgccacctttggtatt
gggctgcgtgtcagtcaaggctgcgtgcgcttacgcaatgaagacatcgagcatttattc
agtagcgtgcccgtaggcacccgggtggagtttatcaatcaaccgatcaaggccaccgaa
gaactcgacggtaatcgctaccttgaagtgcaccaacccctatcacgcacccaagatgaa
tttgaatctaacgagcccgtgtccttaacattggataaaaccattacacgttttcttgcg
catcctgataccgattcatttgtattaaaacgtttgttagagcagcgcaacggcattccg
actcggattaatccttaa
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