Shewanella aestuarii: HBH39_03850
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Entry
HBH39_03850 CDS
T06921
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
saes
Shewanella aestuarii
Pathway
saes03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HBH39_03850 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_03850 (ung)
Enzymes [BR:
saes01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HBH39_03850 (ung)
DNA repair and recombination proteins [BR:
saes03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HBH39_03850 (ung)
Prokaryotic type
HBH39_03850 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIR16104
UniProt:
A0A6G9QND9
LinkDB
All DBs
Position
PN3F2:835190..835864
Genome browser
AA seq
224 aa
AA seq
DB search
MKNCHWQNWQEFIEAQKQQDYFLELTQFLHQEIEQGKIIFPPQNEIYQAFSLTPLAQVKV
VILGQDPYHGEDQAHGLAFSVKPEVKVPPSLVNIYKELQTDIQGFVKPNHGDLRHWAEQG
VLLLNTVLTVEKGLAHSHAKAGWEIFTDHVLDCLNVQPHPIIFVLWGSHAIKKGSRINNN
LHTVLTGPHPSPLSAYRGFFGCKHFSKVNQQLIKSGLTPIDWQV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atcaaaaattgtcattggcaaaactggcaagagtttattgaggctcaaaaacagcaagat
tattttcttgagttaacacaatttctgcatcaggaaattgagcagggtaaaataattttc
ccgccgcaaaatgaaatatatcaagcttttagcttaactcctttagcgcaggtcaaggtg
gtgattcttggtcaagatccttatcatggtgaagatcaagctcatgggttggcattttct
gtcaagccagaggtcaaagttccgccttctttagtcaacatttataaggagttgcaaacc
gatattcaaggttttgtaaaacctaatcatggtgatttacgccattgggctgaacaaggt
gtcttattacttaatacagtattgacggttgaaaagggcttggcgcattctcatgctaaa
gcaggctgggaaatctttactgatcatgttttagattgtttaaacgttcagccacatccc
attatatttgtattatggggtagtcatgctattaagaaaggcagcagaattaataataat
ttgcatacagtgttaactgggccgcacccatctcctttatctgcctatcgaggttttttt
ggttgtaagcatttttcgaaagtgaatcagcaattgattaaaagtggattaacaccgatt
gactggcaggtttaa
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