Shewanella aestuarii: HBH39_03895
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Entry
HBH39_03895 CDS
T06921
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
saes
Shewanella aestuarii
Pathway
saes02020
Two-component system
saes02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HBH39_03895
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
HBH39_03895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
saes02035
]
HBH39_03895
Bacterial motility proteins [BR:
saes02035
]
Flagellar system
Chemotaxis proteins
MCPs
HBH39_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
PycTM
HAMP_2
DUF948
Ccdc124
CovS-like_HAMP
Pex24p
Motif
Other DBs
NCBI-ProteinID:
QIR13744
UniProt:
A0A6G9QGS3
LinkDB
All DBs
Position
PN3F2:complement(841964..843985)
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AA seq
673 aa
AA seq
DB search
MKINVATRVIGGFSVVTLLLIVLGAVTLQGNSRIKEGTETLQQVSLPALESTNLLSENLN
AQQLETLLAYYSNHSSKIPAIDKNLATENKNFQSELNTLSSLIADQNALSQPLRQLKTAY
TTFESNNQRMLKERQSALSKQEKLLTMRGDLENAADDASSILLDVIDLETSDNEIERSIA
ASAGVVDSTFVNLITTVYDLVAATELNKYQLIVKELDYMLGEAKSKLSHIHMQGNGVIDN
DVLQDLTTETDKVFSLLSGSSSIITIKSQQLTHDATAAEALSETLKSATNANNKMTELAN
AIQRFTDTISTNAIEVIDSAVVTTMIVVLGAILVAIFVSIAVVRPLTRSLGQVNQALNVL
ASGDLTHKLDDSGHDEFAELSKNCNRLVDSLRSLITGIVDRSNQLAAAAEETSAITSQTT
IGIQEQKSQVDQVATATTELNSSAQQVSMSADQALDQIKQADQETQHMRALAEESKQTIL
ALAEEVSKAGTVINKLHTDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAV
VADEVRSLASRTQDSTREIQQMIEVLQQGAQEAVAVMELGSAQASSCVDKNEQANLALET
IIKSVHNAFDSGTHIAHAAQEQNLVSQQVSEKLEHIALISEETATGADQTAQSSHQVAML
AEELQASVGEFKV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaatgtagcgactagagttattggcggtttttccgttgtaactttattgctg
attgtccttggagcagtaacactgcaaggtaacagcagaattaaagagggtacagaaaca
ttacagcaagtcagtttacccgctttagagtctactaacttattgagtgaaaacctaaac
gctcaacagctagaaacattacttgcttactacagcaatcactcatccaaaattcctgcc
atcgataaaaacttagcaacagagaataagaattttcaatcagaattaaacaccttatcc
agtttaatcgctgatcaaaatgcgctttctcagcctcttcgccagttaaaaaccgcctat
acaacttttgaatcgaataaccaacgtatgctcaaagagcgccagagcgcactttctaag
caagaaaaattattaactatgcgtggcgatcttgaaaatgcagctgatgatgcatcatcc
atcttgttagacgttattgatttagaaaccagtgacaatgaaatcgaacgcagtattgct
gcctcagcaggggttgttgatagcacattcgtcaaccttattaccactgtgtatgattta
gttgctgcaactgaactgaataagtaccagcttattgttaaagaattagattacatgctt
ggtgaagccaaaagtaaactcagccatattcatatgcaaggtaacggtgtcattgataat
gatgtactgcaagatttaaccaccgaaaccgataaagtgtttagtctgttaagtggttca
agctcaatcattaccataaaaagtcaacaattaacccatgatgcaactgcagccgaagct
ttatctgaaacattgaaaagtgctaccaatgctaataataaaatgactgaattagcaaat
gccattcaacgattcactgataccattagcacaaatgccatcgaagtaattgactcagct
gtagtcaccaccatgattgtggtattaggcgctatcttggttgctatatttgtcagtatc
gctgtggttcgcccattaactcgctcactagggcaagttaaccaagcgctcaatgtatta
gcttcaggtgatttaacgcataaattggatgatagcggacatgatgaatttgctgaacta
tctaaaaactgcaaccgattagttgatagtttacgcagcttgatcactggtattgttgat
cgctcaaatcaattggcagccgcagcggaagaaacatcagcgatcacatcgcaaacgacc
attggcattcaagagcagaagagtcaagtggatcaagttgccaccgcaacaaccgagtta
aactcaagcgcacaacaagtttcgatgagtgcagatcaagccttagatcaaattaaacaa
gccgatcaagaaactcagcacatgcgtgctcttgcagaagaaagcaaacaaactattttg
gcacttgccgaagaagtcagcaaagcgggtaccgttatcaataaactgcatactgatagc
gcctcaattggctctattctagatgttatccgtggtattgctgagcaaaccaacttgtta
gctttaaacgctgcgatcgaagcggcacgtgcaggtgaacaaggcagaggctttgctgtt
gtagccgatgaagtaagaagccttgcatctcgaacacaagactctacgcgtgaaatccag
cagatgatcgaagtgctacagcaaggcgcgcaagaagcggttgcggtaatggaattaggc
agcgcccaagccagtagttgtgtcgataagaatgaacaagcaaacttagccttagaaacc
atcatcaagtctgtgcataacgcatttgattcaggtactcacattgcccatgctgcacag
gagcaaaatcttgtaagccaacaagtctctgaaaaacttgaacatatagcactaatttct
gaagaaactgctacaggagccgaccaaacagctcagtcgagtcatcaagttgctatgctt
gctgaagagctgcaagcctctgtgggagagtttaaagtctaa
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