Shewanella aestuarii: HBH39_04090
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Entry
HBH39_04090 CDS
T06921
Symbol
rlmE
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
saes03009
]
HBH39_04090 (rlmE)
Enzymes [BR:
saes01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
HBH39_04090 (rlmE)
Ribosome biogenesis [BR:
saes03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HBH39_04090 (rlmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltr_RsmB-F
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
QIR13781
UniProt:
A0A6G9QIS2
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All DBs
Position
PN3F2:880947..881576
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AA seq
209 aa
AA seq
DB search
MVTKKRTASSARWMQEHFDDHYVKLAQKRGFRSRAAFKLEEIQQKDQLIKQGMTVVDLGA
APGGWSQVAVKLAGEKGKVIACDILPMDPIVGVDFLQGDFREEKVLDALLSRVGEAKVDV
VLSDMAPNMSGSGAVDQPRAMYLVELALDMCHQVLAANGCFAVKVFQGEGFDEYMAAVKQ
AFKVVKTRKPDSSRARSREVYIVATGYKL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggtaactaaaaaacgtaccgcgagctcagctcgctggatgcaagaacattttgatgac
cactatgttaaattagctcaaaagcgaggctttcgctcaagagctgcatttaagttagag
gaaattcagcagaaagatcaattgatcaagcaaggaatgaccgtcgtagatttaggtgca
gcccctggcggttggtctcaagttgctgtaaaacttgctggagaaaaaggtaaagttatt
gcctgtgatattttaccaatggatccaattgttggtgttgattttcttcaaggtgacttc
agggaagaaaaagtactcgatgcattattgtccagagtaggtgaagcgaaagttgatgtg
gtattatcggatatggcacccaatatgagtggttccggtgcggtagatcaaccacgggca
atgtatttagttgagctggcattggatatgtgtcatcaagtattagctgctaacggttgt
tttgctgttaaagtctttcagggggagggctttgatgagtatatggcagcggttaagcaa
gcttttaaagtggtaaaaacccgtaaaccagactcttctagagcacgctctcgagaagtc
tatatagtggcgactggttacaagttgtag
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