Shewanella aestuarii: HBH39_04135
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Entry
HBH39_04135 CDS
T06921
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saes03021
]
HBH39_04135 (nusA)
03009 Ribosome biogenesis [BR:
saes03009
]
HBH39_04135 (nusA)
Transcription machinery [BR:
saes03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
HBH39_04135 (nusA)
Ribosome biogenesis [BR:
saes03009
]
Prokaryotic type
rRNA transcription factors
HBH39_04135 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
Glyoxalase_4
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
QIR13788
UniProt:
A0A6G9QHB5
LinkDB
All DBs
Position
PN3F2:888143..889642
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AA seq
499 aa
AA seq
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MNKEILLVAEAVSNEKAVPREKIFEALEIALATATKKKYEGDIEVRVSIDRKTGHYDTFR
RWKVIDDNGEALENPYSEITLEAARYENPDIQVGEYIEDEIESVVFDRITTQTAKQVIVQ
KVREAERAQVVEQFIDRQGEIVTGVVKKSTRENVVVDLGNNADGVLFKEDLISRESFRPG
DRVRALLYAVRPEARGAQIFLTRSKPEMLIELFRVEVPEIYDEMIEIMGAARDPGARAKI
AVKSNDKRIDPIGACVGMRGARVQAVSNELGGERVDIVMWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVI
DLFVSSLDVDEDFASVLAEEGFTSLEEIAYVPESELLAIDGFDEDIVAALRERAKAAIST
RALASEEALDDAHPSEDLLALEGLETHLAFVLASKGVVTLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtagcagaagcggtttcaaatgagaaagcggttccgcgt
gagaaaatttttgaagcattagaaattgcacttgctacagcaaccaagaaaaagtacgaa
ggtgatattgaagttcgtgtttctattgaccgcaaaaccggtcactatgacacttttcgt
cgctggaaggttattgatgacaatggcgaagctcttgaaaacccttacagtgaaattacg
ttagaagcagctcgctacgaaaacccagatattcaagtaggtgagtacattgaagacgag
attgagtctgtcgtttttgatcgcattacaactcaaactgctaagcaagttattgttcaa
aaagtccgtgaggctgagcgagcacaagttgtagagcaatttattgatcgtcaaggtgaa
atcgtaactggtgttgtcaaaaagagcacccgtgaaaatgttgttgttgatttaggtaat
aacgctgatggcgtattatttaaagaagacttaatcagtcgtgaatcattccgtccaggt
gatcgcgttcgtgcattactttatgccgttcgccctgaagcacgtggtgcacaaatattt
ttaacacgtagtaaaccggaaatgttaattgaacttttccgagttgaagtaccagaaatt
tacgacgaaatgattgaaatcatgggcgcagctcgtgatcctggtgctcgtgctaaaatc
gcagttaaatctaatgataagcgcattgatcctatcggtgcttgtgttggtatgcgtggt
gcacgtgtgcaagccgtatctaacgaacttggtggtgagcgtgttgatattgttatgtgg
gatgataatcctgctcagtacgttattaacgcaatggcgccagcagatgttgcttcaatc
atcgttgatgaagataaccactcaatggatatcgcagtagaagctgatagcttagcacaa
gcaattggccgtaatggtcaaaacgtacgtttagcaacacaacttaccggttgggaacta
aacgttatgacagttgaagatatgaataagaaacaccaggctgaaagcgccaaggtgatc
gatttatttgtttcttcgttagatgtagatgaagattttgcgtcagttttagccgaggaa
ggatttacttcattagaagaaattgcctatgtgcctgaatctgaattattagcaatagat
ggatttgatgaagatattgttgcagcattgcgtgagcgtgcaaaagcagcaatttcaact
cgtgcactcgcttctgaagaagcattagatgatgcacatccaagtgaagacttattagcg
cttgaaggtttagagactcaccttgcatttgttttagcaagtaaaggtgtagtgacattg
gaagaccttgctgagcaaggtatcgatgatttaatcgaaattgaagaattgacagaagaa
aaagcaggtgagctcatcatggctgcccgcaacatctgttggtttggcgaagaagcataa
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