Shewanella aestuarii: HBH39_04150
Help
Entry
HBH39_04150 CDS
T06921
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
saes
Shewanella aestuarii
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saes03016
]
HBH39_04150 (truB)
Enzymes [BR:
saes01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HBH39_04150 (truB)
Transfer RNA biogenesis [BR:
saes03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HBH39_04150 (truB)
Prokaryotic type
HBH39_04150 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Nrd1-Seb1_dom2
Motif
Other DBs
NCBI-ProteinID:
QIR13791
UniProt:
A0A6G9QIT2
LinkDB
All DBs
Position
PN3F2:892804..893757
Genome browser
AA seq
317 aa
AA seq
DB search
MARRQKGRFIDGIVLLDKDTGMSSNHALQRVKRFFNANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVEVRDIAFSHEKLLTALEHFRGNTMQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPITVFELNFIKLEGNELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYEKMVSLSQLEALVASAQEQGVEPKELLDPLL
LPMDTAVANFPEINLPQSMLYYVMQGQAIQASGLKPDELVRITIGEQRQFVGIGSMNDDG
LLAPKRLIVLREDTLAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcggcaaaaaggtcgttttattgatggtattgttttgctcgacaaagacacc
ggcatgagctctaatcacgccttacagcgggttaagcgattttttaatgctaataaggca
ggacacactggagccttagatccattagctacgggtatgctacctatatgtttaggtgag
gctactaagttttctcaacacttgttagatgcggataaacgttacttagtgacagccaaa
ttaggtgagcgcacagatactagcgattctgacggtgaagtggtagaagttcgcgatatt
gctttttctcatgaaaaactgctgacagcactcgagcatttccgtggtaataccatgcaa
gtcccgtcgatgtactctgcgttaaagtatcaaggtcagcctttatataagtatgcccgt
gaaggcattgaagtgccgcgtgaagctcgcccaatcacagtctttgagcttaactttatt
aaacttgaaggtaatgagttaactttagatattcattgctcaaaaggaacttatattcgc
acaattattgatgatttaggcgaaatgcttggttgtggtgcacatgtgataatgctccgc
agaactcaagttgcacagtatccgtatgagaaaatggttagcctgtcacaacttgaagcc
ttagtcgcctctgcacaagaacagggcgtagagcccaaagagttgctagacccactattg
ttacccatggatacagctgtcgctaacttccccgaaatcaacttacctcagagtatgctg
tattatgtgatgcaagggcaagcgattcaggcttcaggcttaaaaccggatgagttagtt
aggattaccattggtgagcagcgacaatttgtcgggataggcagtatgaacgatgacggg
ttactagcacctaagcgattaattgttctgcgcgaagatacactggcgagctaa
DBGET
integrated database retrieval system
