Shewanella aestuarii: HBH39_09095
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Entry
HBH39_09095 CDS
T06921
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
saes
Shewanella aestuarii
Pathway
saes03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HBH39_09095 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
saes03011
]
HBH39_09095 (rpsA)
Ribosome [BR:
saes03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HBH39_09095 (rpsA)
Bacteria
HBH39_09095 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QIR14628
UniProt:
A0A6G9QJR9
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All DBs
Position
PN3F2:complement(2013871..2015538)
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AA seq
555 aa
AA seq
DB search
MTESFADLFEQSLQQLEFRPGSIVRGTVVAIENGMVLVDAGLKSESPINADEFKNAQGVL
EIQVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTKLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKVNPWDDFATR
FNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEDAVSEYKKGDEIHAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGTVVNGTVSAVDAKGVTVELADTVEGYIRV
ADISAERIEDASTVYTVGDAIEAKFMGVDRKNRSISLSIRAKDEAEQKEAIATLNKQDDA
VISNAMAEAFKAARK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcttttgctgatctatttgaacaatcccttcaacaacttgagttccgccca
ggttctatcgttcgtggtactgtagttgccatcgaaaacggtatggtacttgttgacgct
ggtcttaagtctgaaagcccaatcaatgctgacgaattcaaaaacgcacaaggcgtttta
gaaattcaagttggcgatgaagttgatgttgcgcttgactctgttgaagatggctttggt
gagactcaattatctcgcgaaaaagctaagcgtcatgaagcttggatcgttctagaaaaa
gcgtacgaagatgctgaaactgtaatcggtatcattaatggtaaagttaaaggtggtttc
actgttgaattaaacggtatccgtgccttcttaccaggttctctagttgatgtgcgccca
gttcgcgacaccgctcacttagagtacaaagaattagaattcaaagttatcaagcttgac
cagaagcgtaacaatgttgttgtttctcgtcgtgctgttatcgaatcagaaagcagtgct
gagcgtgatgcacttcttgaaaatctacaagaaggccaagcagttaagggtatcgttaag
aaccttactgactacggtgcattcgtagatttaggtggtgttgacggtctattacatatc
actgatatggcgtggaagcgtgttaagcacccatctgaaatcgttaatgttggtgacgaa
atcaacgttaaagtacttaagtatgaccgtgagcgtactcgcgtatcattaggtcttaag
caacttggcgaagatccatggttagaaatcagcaaacgctacccagaaaacactaagtta
actggtcgcgtaactaacttaactgactacggttgcttcgtagaaatcgaagaaggcgtt
gaaggtttagtacacgtttctgaaatggattggactaacaagaacattcacccatctaaa
gttgttaacttaggtgatgaagttgaagtgttagtattagatatcgatgaagaacgtcgt
cgtatttctctaggccttaaacagtgtaaagttaacccatgggatgacttcgctactcgt
ttcaacaaaggcgacaaagtatctggtaagatcaagtcaatcactgacttcggtatcttt
atcggtcttgacggtggaatcgatggtcttgttcacttatctgacatttcttggaacggt
actggcgaagacgcagtatctgaatacaagaaaggcgacgaaatccacgctgtagttcta
tctgtagatccagagcgtgagcgtatcagcttaggtgttaagcaaactgaagatgatcca
ttcaatgcttacttagcagacaagaagaaaggtactgttgtaaatggtacagtttctgct
gttgacgctaaaggtgttacagttgaactagctgacactgttgaaggttatattcgtgtt
gctgacatttctgcagagcgcattgaagatgcatctactgtttacacagtaggcgatgca
atcgaagctaagttcatgggtgttgatcgtaagaaccgttctatcagcttatcaatccgt
gctaaggatgaagctgagcagaaagaagcgatcgctactttgaacaagcaagatgacgca
gttatcagcaatgcaatggctgaagcgtttaaagctgctcgtaagtaa
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