Shewanella aestuarii: HBH39_09240
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Entry
HBH39_09240 CDS
T06921
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
saes
Shewanella aestuarii
Pathway
saes03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HBH39_09240 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_09240 (uvrB)
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HBH39_09240 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HBH39_09240 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
Kinesin
Ish1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIR14652
UniProt:
A0A6G9QJK3
LinkDB
All DBs
Position
PN3F2:complement(2051429..2053462)
Genome browser
AA seq
677 aa
AA seq
DB search
MSEPIFRLESQFAPAGDQPTAIKQLVEGIDNGIASQTLLGVTGSGKTYTIANVIQATGRP
TIIMAPNKTLAAQLYGEMKEFFPHNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERRDVVLIASVSAIYGLGDPDSYMKMLLHLRQGDFMGQRDILIRLSEL
QYTRNDIELQRGTYRVRGEVIDIFPAESEREAIRIELFDDEIERLSEFDPLTGQINKRIA
RTTIYPKTHYVTPREKVLAATEEIKQELRERRQFLLDNNKLIEAQRITERVQYDVEMMVE
LGYCSGIENYSRYLSGRAQGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFENLMPQTIFVSATPSQYELDKSDGEIAEQVVRPTGLL
DPVLEVRPVSIQVDDLLSEIHKRVQVNERVLVTTLTKRMSEDLTDYLDEHGVKVRYLHSD
IDTVERMEIIRDLRLGHFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITNSMAKAIGETDRRREKQRLHNEKYGIVPKGVVKRITDVMDV
GESKQGSRTSNKGYQQSAQQSKVDESKAHYVSVSELSHQIDRLEKQMHEHAKNLEFEQAA
ALRDEVKHLREQIIAIS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaacctatttttcgtcttgaatcgcaatttgcaccagcaggtgatcaacccacg
gccattaaacaactagttgaaggaatagataatggtattgcgagtcaaactctccttggg
gtaacaggctctggaaaaacctataccattgcaaatgttattcaagcaacgggccggccg
accattatcatggcgcccaataaaacattagcagcacaactctacggcgagatgaaagag
ttctttccgcataatgcagttgaatattttgtttcttattatgattactatcaacctgaa
gcctacgtgcctgcatcaaatacttttatcgagaaagacgcttcagttaatgcccacatt
gaacaaatgcgcttatcagcaactaaagccttattagaaagaagggacgtggtattaatt
gcctcggtgtcagctatttatgggttgggtgatcctgattcatacatgaaaatgctactg
catcttcgtcaaggcgattttatggggcagcgtgatattttaattcgattaagtgagttg
caatatactcgtaatgatatcgaactacagcgaggcacttatcgcgttcgaggtgaagtc
attgatattttcccggctgaatctgagcgtgaggcaattagaattgagctatttgatgac
gaaattgaacgcttgagtgagtttgacccattaacggggcaaattaataagcggatagca
cgaaccaccatttaccccaaaacacactatgttaccccaagagaaaaggtattagcggcg
accgaagaaattaagcaagagctaagagaaaggcgtcagtttttgcttgataataacaag
ctgattgaggcacaacgaattactgagcgtgtccaatatgatgtcgagatgatggttgaa
cttggctattgctcgggcattgaaaactattcacgttatttatccggtagggcgcaaggc
gaaggcccaccaaccttactggattatttgccagcagatggtttacttatcattgatgaa
tcccatgtcacagtgccgcaaattggcgccatgtacaagggcgatcgcagccgcaaaacc
accttggttgaatacggttttcgtttaccttcggcattagataatcggccattgaagttt
gaagaatttgaaaacttgatgccgcaaaccatttttgtgtcagcaacacccagccaatat
gaattagataaaagtgacggcgaaattgcagagcaggtggttagacccacaggtttgctt
gatcctgtacttgaagtacggccggtttcgattcaggtagacgacttattatcggaaatt
cataaacgggtacaagttaatgagcgggtattagttaccacgttaaccaaacgcatgtca
gaagatttgactgactatttagatgaacatggcgttaaggtgcgttatctgcactcggac
atagatacggttgaacgcatggagatcattcgcgatctgcgcttaggacactttgatgtc
ttagtgggcatcaacctactacgtgaaggtttagacatgccagaggtgtctttagtgtgt
attttagatgccgataaagaaggttttttacgctcagagcgatcattaatacaaaccata
ggtcgtgcagctcgaaacgtgaacggtaaagtgattttgtatgcagacaggatcactaat
tcaatggcaaaagcgataggagaaacggatcgtcgccgcgagaaacaaaggttacataat
gaaaagtacggcattgtgcctaaaggtgtggtgaagcgcattaccgatgtgatggatgtt
ggcgaaagcaagcaaggcagccgaacatctaacaagggttatcaacaatcggcacaacaa
agtaaagttgatgagtcaaaggcgcattatgtaagtgtgagtgagttaagtcatcaaatt
gatcggttagaaaagcagatgcatgagcatgctaaaaacctagagtttgagcaagccgca
gcattacgggatgaagtaaagcatttacgagagcaaatcattgcaatttcatag
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integrated database retrieval system
