Shewanella aestuarii: HBH39_09515
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Entry
HBH39_09515 CDS
T06921
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
saes
Shewanella aestuarii
Pathway
saes00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HBH39_09515 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
saes01007
]
HBH39_09515 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
saes03016
]
HBH39_09515 (serS)
Enzymes [BR:
saes01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
HBH39_09515 (serS)
Amino acid related enzymes [BR:
saes01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
HBH39_09515 (serS)
Transfer RNA biogenesis [BR:
saes03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
HBH39_09515 (serS)
Prokaryotic type
HBH39_09515 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
End3
CEP63
NET2A_C
ERM_helical
FlxA
Motif
Other DBs
NCBI-ProteinID:
QIR14691
UniProt:
A0A6G9QLH6
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All DBs
Position
PN3F2:complement(2104394..2105680)
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AA seq
428 aa
AA seq
DB search
MLDPKFLRTELEFTAERLATRGYQLDVDHISSLEEKRKTLQVQTEELQASRNAISKSIGQ
AKSRGEDIAPIMAQVGDLGSQLDAKKAELALLLQELNMIAMSIPNLPDDSVPTGADENDN
VEVRRWGTPKAFDFEVKDHLDLGEGVQGLDFKNAVKITGSRFIVMKGQVARLNRALGQFM
LDMHTTKHGYTEAYVPLLVNEDSLLGTGQLPKFGEDLFHTKPATEEAQSLSLIPTAEVPL
TNLVRDTIVEEADLPIKMTALTACFRSEAGSYGRDTRGLIRQHQFDKVELVQIVHPEHSM
AALDELTQHAENILQALELPYRTVVLCTGDMGFGASKTFDIEVWLPAQNTYREISSCSNM
KDFQARRMQARYRNKADNKPALLHTLNGSGLAVGRTLVAILENYQNADGTITVPTVLRPY
MGGLEVIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctagatccaaaatttttgcgtaccgaattggaattcactgctgagcgattagcaacc
cgtggttatcaacttgatgttgatcatatttcctcattagaagaaaagcgtaaaacgctc
caagtgcaaacagaagagttacaagcttcgcgtaatgccatctctaagtcgattggtcaa
gctaagtcacgcggtgaagatattgcacctattatggcgcaagtgggtgatttaggttcg
caattagacgcaaaaaaagcggaattagccttgttattgcaagagttaaacatgattgca
atgagcatacctaacttgcccgatgacagtgttccaacaggcgctgatgaaaatgataat
gtggaagttcgtcgctggggcacaccaaaagcatttgattttgaagtgaaagatcattta
gatctaggcgaaggtgttcaaggcttagattttaaaaatgcggttaaaattaccggctct
cgctttattgtaatgaaagggcaagtcgcacgtttaaaccgtgctcttggtcagttcatg
ttagatatgcacactaccaaacacggttacactgaagcatatgtccctttattagtgaat
gaagatagcttgcttggtactgggcagttaccaaagtttggtgaagacttatttcacacc
aaacctgctacagaagaagcccaaagcttgtcactgatccctaccgctgaagttccgtta
actaacttggtccgtgacaccattgttgaagaagctgacttaccgattaaaatgaccgct
ttaacagcgtgttttagaagtgaagcaggctcatacggtcgtgatactcgtggtttaatc
cgccagcatcagtttgataaagttgagcttgtgcaaatcgtacatccagaacactctatg
gcagcattagatgagttaactcagcatgcagaaaacattttgcaagcattagagttgcct
tatcgtaccgtggtgttatgcacgggtgacatgggctttggtgcaagtaaaacctttgat
attgaagtttggttgccagcacaaaatacctatcgtgaaatctcttcttgttcgaatatg
aaggacttccaagcgcgaagaatgcaagctagatatcgtaacaaggcagataacaagcca
gctttattacatacgcttaatggttctggtttggctgtagggcgtacgctagtggcaatt
ttggaaaactaccaaaatgcagatggcactattacagtgccgactgtattacgtccatac
atgggcggattagaggttattggttaa
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